Detail infomation of NONHSAG000478.1--NONCODE

An integrated knowledge database dedicated to ncRNAs, especially lncRNAs.

Detail infomation of NONHSAG000478.1

General info

NONCODE GENE ID	NONHSAG000478.1
Chromosome	chr1
Start Site	16847189
End Site	16848303
Strand	+
Length	577
Assembly	hg19
Class	Linc;
Other Gene Versions	NONHSAG000478.2

Transcripts in Gene

NONCODE TRANSCRIPT ID

NONHSAT001132.1

NONHSAT001133.1

NONHSAT001134.1

Expression Profile (Data Source:)

adipose	adrenal	brain	brain_R	breast	colon

foreskin	heart	heart_R	HLF_1	HLF_2	kidney

liver	liver_R	lung	lymphNode	ovary	placenta_R

prostate	skeltalMuscle	testes	testes_R	thyroid	whiteBloodCell

NA

Exosome Expression Profile (Data Source: NCBI GEO)

NA

Expression Profile (Data Source: Single Cell)

Conservation Info

Chordata
- Vertebrates
  - Manmals
    - Primates
      - Human
      - Chimp : N/A
      - Gorilla : N/A
      - Orangutan : N/A
      - Rhesus : N/A
    - Rodents
      - Mouse : N/A
      - Rat : N/A
    - Laurasiatheria
      - Pig : N/A
      - Cow : N/A
    - Opossum : N/A
    - Platypus : N/A
  - Birds
    - Chicken : N/A
- Actinopteryqii
  - Zebrafish : N/A

Note: T = There are transcripts in this region.

Disease related

Disease:

NONCODE ID	Gene Symbol	Disease name	Source Database	Source PMID
NONHSAG000478.2	lnc-AL355149.1-1	tongue squamous cell carcinoma	Lnc2Cancer	25045670
NONHSAG000478.2	lnc-AL355149.1-1	nasopharynx carcinoma	Lnc2Cancer	24822202
NONHSAG000478.2	lnc-AL355149.1-1	nasopharyngeal carcinoma	Lnc2Cancer	24822202
NONHSAG000478.2	lnc-AL355149.1-1	nasopharyngeal carcinoma	LncRNADisease	24822202

Mutations:

NONCODE ID	SNP ID	GWAS trait	Source PMID
NONHSAG000478.2	rs277462	Serum ratio of (phenylacetylglutamine)/(quinate)	21886157

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