Detail infomation of NONHSAG000579.2--NONCODE

An integrated knowledge database dedicated to ncRNAs, especially lncRNAs.

Detail infomation of NONHSAG000579.2

General info

NONCODE GENE ID	NONHSAG000579.2
Chromosome	chr1
Start Site	20642656
End Site	20652193
Strand	-
Length	4443
Assembly	hg38
Class	Exonic;
Other Gene Versions	NONHSAG000579.3

Transcripts in Gene

NONCODE TRANSCRIPT ID

Expression Profile (Data Source:Human Body Map)

adipose	adrenal	brain	brain_R	breast	colon

foreskin	heart	heart_R	HLF_1	HLF_2	kidney

liver	liver_R	lung	lymphNode	ovary	placenta_R

prostate	skeltalMuscle	testes	testes_R	thyroid	whiteBloodCell

NA

Exosome Expression Profile (Data Source: NCBI GEO)

NA

Expression Profile (Data Source: Single Cell)

Conservation Info

Chordata
- Vertebrates
  - Manmals
    - Primates
      - Human
      - Chimp : N/A
      - Gorilla : N/A
      - Orangutan : N/A
      - Rhesus : N/A
    - Rodents
      - Mouse : N/A
      - Rat : N/A
    - Laurasiatheria
      - Pig : N/A
      - Cow : N/A
    - Opossum : N/A
    - Platypus : N/A
  - Birds
    - Chicken : N/A
- Actinopteryqii
  - Zebrafish : N/A

Note: T = There are transcripts in this region.

Disease related

Disease:

NONCODE ID	Gene Symbol	Disease name	Source Database	Source PMID
NONHSAG000579.3	PINK1-AS	Parkinson's disease	MNDR	17362513
NONHSAG000579.3	PINK1-AS	glucose metabolism disorder	LncRNADisease	22817756
NONHSAG000579.3	PINK1-AS	Parkinson's disease	LncRNADisease	17362513

Mutations:

NONCODE ID	SNP ID	GWAS trait	Source PMID
NONHSAG000579.3	rs2298299	Acute lung injury following major trauma	22295056
NONHSAG000579.3	rs17414302	Gene expression of CDA in peripheral blood monocytes	20502693
NONHSAG000579.3	rs1043424	Gene expression of PINK1 in peripheral blood monocytes	20502693
NONHSAG000579.3	rs1043424	Gene expression of ALDH18A1 in peripheral blood monocytes	20502693
NONHSAG000579.3	rs1043424	Gene expression of PINK1///DDOST in blood	21829388
NONHSAG000579.3	rs1043424	Gene expression of PINK1 in CD4+ lymphocytes	20833654
NONHSAG000579.3	rs1043424	Serum ratio of (glycodeoxycholate)/(tiglyl carnitine)	21886157
NONHSAG000579.3	rs1043424	Serum ratio of (10-nonadecenoate (19:1n9))/(palmitoleate (16:1n7))	21886157
NONHSAG000579.3	rs686658	Allele-specific Expression Patterns in human glioblastoma cell line U87MG	22467206
NONHSAG000579.3	rs1043443	Gene expression of PINK1 in peripheral blood monocytes	20502693
NONHSAG000579.3	rs1043443	Gene expression of ALDH18A1 in peripheral blood monocytes	20502693
NONHSAG000579.3	rs8064	Gene expression of CDA in peripheral blood monocytes	20502693
NONHSAG000579.3	rs8064	Gene expression of PINK1 in peripheral blood monocytes	20502693
NONHSAG000579.3	rs1573132	Risperidone response in schizophrenia treatment	19850283
NONHSAG000579.3	rs650616	Allele-specific Expression Patterns in human glioblastoma cell line U87MG	22467206
NONHSAG000579.3	rs639455	Gene expression of CDA (probeID ILMN_1714592) in temporal cortex in Alzheimer's disease cases and controls	22685416
NONHSAG000579.3	rs639455	Gene expression of CDA (probeID ILMN_1714592) in cerebellum in Alzheimer's disease cases and controls	22685416

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