Detail infomation of NONHSAG000624.2--NONCODE

An integrated knowledge database dedicated to ncRNAs, especially lncRNAs.

Detail infomation of NONHSAG000624.2

General info

NONCODE GENE ID	NONHSAG000624.2
Chromosome	chr1
Start Site	22010649
End Site	22010944
Strand	+
Length	295
Assembly	hg38
Class	Sense No Exonic;
Other Gene Versions	NONHSAG000624.1(old version)

Transcripts in Gene

NONCODE TRANSCRIPT ID

NONHSAT001453.2

Expression Profile (Data Source:Human Body Map)

adipose	adrenal	brain	brain_R	breast	colon
0	1.58875	1.25187	0	1.04142	0
foreskin	heart	heart_R	HLF_1	HLF_2	kidney
0	0.283516	0	1.24989	0	0
liver	liver_R	lung	lymphNode	ovary	placenta_R
0	0	0	0	0.892712	0.408487
prostate	skeltalMuscle	testes	testes_R	thyroid	whiteBloodCell
0.564977	0	0.277288	0	0.55815	0

Expression profile of NONHSAG000624 in Human tissues

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Exosome Expression Profile (Data Source: NCBI GEO)

A431_cellLine (Squamous Cell Carcinoma Cell Line Exosomes)	BJ_cellLine (Foreskin Fibroblast Cell Line Exosomes)	HepG2_cellLine (Hepatocellular Carcinoma Cell Line Exosomes)	HUVEC_cellLine (Human Umbilical Vein Endothelial Cell Line Exosomes)	invasive_NFPAs (Invasive Non-functional Pituitary Adenomas Exosomes)
0	0	0	0	4.12924
non-invasive_NFPAs (Non-invasive Non-functional Pituitary Adenomas Exosomes)	MCF7_cellLine (Human Breast Cancer Cell Line Exosomes)	MDA-MB-231_cellLine (Human Breast Cancer Cell Line Exosomes)	tuberculosis_patients_serum (Active Tuberculosis Patients Serum Exosomes)	normal_people_blood (Normal People Blood Exosomes)
0.857745	0	0	1.56783	0

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Expression Profile (Data Source: Single Cell)

Conservation Info

Chordata
- Vertebrates
  - Manmals
    - Primates
      - Human
      - Chimp : chr1( len:295 )
      - Gorilla : chr1( len:295 )
      - Orangutan : chr1( len:294 )
      - Rhesus : chr1( len:332 )
    - Rodents
      - Mouse : N/A
      - Rat : N/A
    - Laurasiatheria
      - Pig : N/A
      - Cow : N/A
    - Opossum : N/A
    - Platypus : N/A
  - Birds
    - Chicken : N/A
- Actinopteryqii
  - Zebrafish : N/A

Note: T = There are transcripts in this region.

Disease related

Disease:

NONCODE ID	Gene Symbol	Disease name	Source Database	Source PMID
NONHSAG000624.2	7SL	AIDS,dermatomyositis	LncRNAWiki	0
NONHSAG000624.2	7SL	AIDS	LncRNADisease	20926562
NONHSAG000624.2	7SL	AIDS	LncRNADisease	16489186
NONHSAG000624.2	7SL	dermatomyositis	LncRNADisease	16142868
NONHSAG000624.2	7SL	Leishmania	LncRNADisease	15955815
NONHSAG000624.2	7SL	Leishmania	LncRNADisease	20392923
NONHSAG000624.2	7SL	Leishmania	LncRNADisease	20856851
NONHSAG000624.2	7SL	Leishmania	LncRNADisease	20561310
NONHSAG000624.2	7SL	polymyositis	LncRNADisease	16142868

Mutations:

NONCODE ID	SNP ID	GWAS trait	Source PMID
NONHSAG000624.2	rs10917109	Endometriosis	23472165
NONHSAG000624.2	rs74464236	Endometriosis	23472165
NONHSAG000624.2	rs10917111	Endometriosis	23472165

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