An integrated knowledge database dedicated to ncRNAs, especially lncRNAs.
Detail infomation of NONHSAG000742.2

General info

NONCODE GENE IDNONHSAG000742.2
Chromosomechr1
Start Site25816734
End Site25823606
Strand-
Length6178
Assemblyhg38
ClassAntisense;
Other Gene VersionsNONHSAG000742.3

Transcripts in Gene

NONCODE TRANSCRIPT ID
NONHSAT151294.1
NONHSAT151295.1
NONHSAT001750.2

Expression Profile (Data Source:Human Body Map)

adiposeadrenalbrainbrain_Rbreastcolon
foreskinheartheart_RHLF_1HLF_2kidney
liverliver_RlunglymphNodeovaryplacenta_R
prostateskeltalMuscletestestestes_RthyroidwhiteBloodCell
NA

Exosome Expression Profile (Data Source: NCBI GEO)

NA

Expression Profile (Data Source: Single Cell)

Conservation Info

  • Chordata
    • Vertebrates
      • Manmals
        • Primates
          • Human
          • Chimp : N/A
          • Gorilla : N/A
          • Orangutan : N/A
          • Rhesus : N/A
        • Rodents
          • Mouse : N/A
          • Rat : N/A
        • Laurasiatheria
          • Pig : N/A
          • Cow : N/A
        • Opossum : N/A
        • Platypus : N/A
      • Birds
        • Chicken : N/A
    • Actinopteryqii
      • Zebrafish : N/A

Note: T = There are transcripts in this region.

Disease related

Disease:

NONCODE IDGene SymbolDisease nameSource DatabaseSource PMID
NONHSAG000742.3RP1-317E23.3non-small cell lung carcinomaLnc2Cancer25394782
NONHSAG000742.3RP1-317E23.3non-small cell lung cancerLnc2Cancer25394782

Mutations:

NONCODE IDSNP IDGWAS traitSource PMID
NONHSAG000742.3rs1044183Methylation levels at chr1:32417230-32417280 [hg18 coord, probe cg21093060] in Cerebellum20485568
NONHSAG000742.3rs1044183Methylation levels at chr6:160102428-160102478 [hg18 coord, probe cg15298323] in Cerebellum20485568
NONHSAG000742.3rs1044183Methylation levels at chr8:104102744-104102794 [hg18 coord, probe cg22925006] in Cerebellum20485568
NONHSAG000742.3rs1044183Methylation levels at chr12:14847273-14847323 [hg18 coord, probe cg02307482] in Cerebellum20485568
NONHSAG000742.3rs1044183Methylation levels at chr20:31219270-31219320 [hg18 coord, probe cg24101873] in Cerebellum20485568
NONHSAG000742.3rs1044183Methylation levels at chr7:99171643-99171693 [hg18 coord, probe cg06459378] in Cerebellum20485568
NONHSAG000742.3rs1044183Methylation levels at chr6:32271032-32271082 [hg18 coord, probe cg26791659] in Cerebellum20485568
NONHSAG000742.3rs1044183Methylation levels at chr4:123011406-123011456 [hg18 coord, probe cg05318777] in Cerebellum20485568
NONHSAG000742.3rs1044183Methylation levels at chr11:45072054-45072104 [hg18 coord, probe cg09699159] in Cerebellum20485568
NONHSAG000742.3rs1044183Methylation levels at chr7:94131321-94131371 [hg18 coord, probe cg21405195] in Cerebellum20485568
NONHSAG000742.3rs1044183Methylation levels at chr10:104463619-104463669 [hg18 coord, probe cg25355065] in Cerebellum20485568
NONHSAG000742.3rs1044183Methylation levels at chr1:52642868-52642918 [hg18 coord, probe cg10586599] in Cerebellum20485568
NONHSAG000742.3rs1044183Methylation levels at chr15:21442445-21442495 [hg18 coord, probe cg21325760] in Cerebellum20485568
NONHSAG000742.3rs1044183Methylation levels at chr3:15618571-15618621 [hg18 coord, probe cg21638219] in Cerebellum20485568
NONHSAG000742.3rs1044183Methylation levels at chr17:40859184-40859234 [hg18 coord, probe cg14154330] in Cerebellum20485568
NONHSAG000742.3rs1044183Serum ratio of (cholate)/(salicylate)21886157
NONHSAG000742.3rs6872Plasma alpha-linolenic acid levels21829377
NONHSAG000742.3rs6872Serum ratio of (oleoylcarnitine)/(stearoylcarnitine)21886157
NONHSAG000742.3rs6872Gene expression of SEPN1 in blood21829388
NONHSAG000742.3rs6872Gene expression of FAM54B in normal prepouch ileum23474282
NONHSAG000742.3rs2294226Gene expression change of C1orf135 (ENSG00000127423) in dendritic cells after treatment with Mycobacterium tuberculosis22233810

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