Detail infomation of NONHSAG000742.3--NONCODE

Detail infomation of NONHSAG000742.3

General info

NONCODE GENE ID	NONHSAG000742.3
Chromosome	chr1
Start Site	25816586
End Site	25823606
Strand	-
Length	6326
Assembly	hg38
Class	Antisense;
Other Gene Versions	NONHSAG000742.2(old version)

Transcripts in Gene

NONCODE TRANSCRIPT ID

Expression Profile (Data Source:Human Body Map)

adipose	adrenal	brain	brain_R	breast	colon
0.647754	0.917363	0.897338	0.422804	0.576456	0.552359
foreskin	heart	heart_R	HLF_1	HLF_2	kidney
0.107234	0.284368	0.0427708	0.0948799	0.309609	0.424829
liver	liver_R	lung	lymphNode	ovary	placenta_R
0.565502	0.0809708	0.983825	1.37065	0.751168	0.278163
prostate	skeltalMuscle	testes	testes_R	thyroid	whiteBloodCell
0.510659	1.24565	1.3753	0.502196	0.607238	0.176822

Expression profile of NONHSAG000742 in Human tissues

Exosome Expression Profile (Data Source: NCBI GEO)

A431_cellLine (Squamous Cell Carcinoma Cell Line Exosomes)	BJ_cellLine (Foreskin Fibroblast Cell Line Exosomes)	HepG2_cellLine (Hepatocellular Carcinoma Cell Line Exosomes)	HUVEC_cellLine (Human Umbilical Vein Endothelial Cell Line Exosomes)	invasive_NFPAs (Invasive Non-functional Pituitary Adenomas Exosomes)
4.2052	30.765	2.89286	36.6814	8.68369
non-invasive_NFPAs (Non-invasive Non-functional Pituitary Adenomas Exosomes)	MCF7_cellLine (Human Breast Cancer Cell Line Exosomes)	MDA-MB-231_cellLine (Human Breast Cancer Cell Line Exosomes)	tuberculosis_patients_serum (Active Tuberculosis Patients Serum Exosomes)	normal_people_blood (Normal People Blood Exosomes)
10.4001	0	0	6.23947	7.10794

Expression Profile (Data Source: Single Cell)

Conservation Info

Chordata
- Vertebrates
  - Manmals
    - Primates
      - Human
      - Chimp : N/A
      - Gorilla : N/A
      - Orangutan : N/A
      - Rhesus : N/A
    - Rodents
      - Mouse : chr4( len:6643 )^T
      - Rat : N/A
    - Laurasiatheria
      - Pig : N/A
      - Cow : chr2( len:8095 )
    - Opossum : N/A
    - Platypus : N/A
  - Birds
    - Chicken : N/A
- Actinopteryqii
  - Zebrafish : N/A

Note: T = There are transcripts in this region.

Disease related

Disease:

NONCODE ID	Gene Symbol	Disease name	Source Database	Source PMID
NONHSAG000742.3	RP1-317E23.3	non-small cell lung carcinoma	Lnc2Cancer	25394782
NONHSAG000742.3	RP1-317E23.3	non-small cell lung cancer	Lnc2Cancer	25394782

Mutations:

NONCODE ID	SNP ID	GWAS trait	Source PMID
NONHSAG000742.3	rs1044183	Methylation levels at chr1:32417230-32417280 [hg18 coord, probe cg21093060] in Cerebellum	20485568
NONHSAG000742.3	rs1044183	Methylation levels at chr6:160102428-160102478 [hg18 coord, probe cg15298323] in Cerebellum	20485568
NONHSAG000742.3	rs1044183	Methylation levels at chr8:104102744-104102794 [hg18 coord, probe cg22925006] in Cerebellum	20485568
NONHSAG000742.3	rs1044183	Methylation levels at chr12:14847273-14847323 [hg18 coord, probe cg02307482] in Cerebellum	20485568
NONHSAG000742.3	rs1044183	Methylation levels at chr20:31219270-31219320 [hg18 coord, probe cg24101873] in Cerebellum	20485568
NONHSAG000742.3	rs1044183	Methylation levels at chr7:99171643-99171693 [hg18 coord, probe cg06459378] in Cerebellum	20485568
NONHSAG000742.3	rs1044183	Methylation levels at chr6:32271032-32271082 [hg18 coord, probe cg26791659] in Cerebellum	20485568
NONHSAG000742.3	rs1044183	Methylation levels at chr4:123011406-123011456 [hg18 coord, probe cg05318777] in Cerebellum	20485568
NONHSAG000742.3	rs1044183	Methylation levels at chr11:45072054-45072104 [hg18 coord, probe cg09699159] in Cerebellum	20485568
NONHSAG000742.3	rs1044183	Methylation levels at chr7:94131321-94131371 [hg18 coord, probe cg21405195] in Cerebellum	20485568
NONHSAG000742.3	rs1044183	Methylation levels at chr10:104463619-104463669 [hg18 coord, probe cg25355065] in Cerebellum	20485568
NONHSAG000742.3	rs1044183	Methylation levels at chr1:52642868-52642918 [hg18 coord, probe cg10586599] in Cerebellum	20485568
NONHSAG000742.3	rs1044183	Methylation levels at chr15:21442445-21442495 [hg18 coord, probe cg21325760] in Cerebellum	20485568
NONHSAG000742.3	rs1044183	Methylation levels at chr3:15618571-15618621 [hg18 coord, probe cg21638219] in Cerebellum	20485568
NONHSAG000742.3	rs1044183	Methylation levels at chr17:40859184-40859234 [hg18 coord, probe cg14154330] in Cerebellum	20485568
NONHSAG000742.3	rs1044183	Serum ratio of (cholate)/(salicylate)	21886157
NONHSAG000742.3	rs6872	Plasma alpha-linolenic acid levels	21829377
NONHSAG000742.3	rs6872	Serum ratio of (oleoylcarnitine)/(stearoylcarnitine)	21886157
NONHSAG000742.3	rs6872	Gene expression of SEPN1 in blood	21829388
NONHSAG000742.3	rs6872	Gene expression of FAM54B in normal prepouch ileum	23474282
NONHSAG000742.3	rs2294226	Gene expression change of C1orf135 (ENSG00000127423) in dendritic cells after treatment with Mycobacterium tuberculosis	22233810

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