An integrated knowledge database dedicated to ncRNAs, especially lncRNAs.
Detail infomation of NONHSAG000840.1

General info

NONCODE GENE IDNONHSAG000840.1
Chromosomechr1
Start Site28578537
End Site28582983
Strand-
Length3377
Assemblyhg38
ClassAntisense;
Other Gene VersionsNONHSAG000840.3

Transcripts in Gene

NONCODE TRANSCRIPT ID
NONHSAT001967.1
NONHSAT001968.1
NONHSAT001969.1
NONHSAT001970.1
NONHSAT001971.1
NONHSAT001972.1
NONHSAT001973.1
NONHSAT001974.1
NONHSAT001975.1
NONHSAT001976.1
NONHSAT001981.1

Expression Profile (Data Source:Human Body Map)

adiposeadrenalbrainbrain_Rbreastcolon
foreskinheartheart_RHLF_1HLF_2kidney
liverliver_RlunglymphNodeovaryplacenta_R
prostateskeltalMuscletestestestes_RthyroidwhiteBloodCell
NA

Exosome Expression Profile (Data Source: NCBI GEO)

NA

Expression Profile (Data Source: Single Cell)

Conservation Info

  • Chordata
    • Vertebrates
      • Manmals
        • Primates
          • Human
          • Chimp : N/A
          • Gorilla : N/A
          • Orangutan : N/A
          • Rhesus : N/A
        • Rodents
          • Mouse : N/A
          • Rat : N/A
        • Laurasiatheria
          • Pig : N/A
          • Cow : N/A
        • Opossum : N/A
        • Platypus : N/A
      • Birds
        • Chicken : N/A
    • Actinopteryqii
      • Zebrafish : N/A

Note: T = There are transcripts in this region.

Disease related

Disease:

NONCODE IDGene SymbolDisease nameSource DatabaseSource PMID
NONHSAG000840.3SNHG12endometrial carcinomaLnc2Cancer25695231
NONHSAG000840.3SNHG12osteosarcomaLncRNAWiki0

Mutations:

NONCODE IDSNP IDGWAS traitSource PMID
NONHSAG000840.3rs9426442Gene expression of PHACTR4 in blood21829388
NONHSAG000840.3rs9426442Gene expression of PHACTR4 in Cerebellum20485568
NONHSAG000840.3rs9426442Gene expression of ATPIF1 in Caudal pons20485568
NONHSAG000840.3rs9426442Gene expression of ATPIF1 in Temporal cortex20485568
NONHSAG000840.3rs9426442Serum ratio of (taurocholate)/(taurolithocholate 3-sulfate)21886157
NONHSAG000840.3rs1342086Gene expression of PHACTR4 in peripheral blood monocytes20502693
NONHSAG000840.3rs1342086Gene expression of PHACTR4 in Cerebellum20485568
NONHSAG000840.3rs1342086Gene expression of ATPIF1 in Caudal pons20485568
NONHSAG000840.3rs1342086Gene expression of ATPIF1 in Temporal cortex20485568
NONHSAG000840.3rs1342086Gene expression of RCC1 in peripheral blood monocytes20502693
NONHSAG000840.3rs1342086Gene expression of FLJ13171 in YRI lymphoblastoid cell lines17873874
NONHSAG000840.3rs1342086Serum ratio of (docosapentaenoate (n3 DPA; 22:5n3))/(eicosapentaenoate (EPA; 20:5n3))21886157

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