Detail infomation of NONHSAG002039.2--NONCODE

An integrated knowledge database dedicated to ncRNAs, especially lncRNAs.

Detail infomation of NONHSAG002039.2

General info

NONCODE GENE ID	NONHSAG002039.2
Chromosome	chr1
Start Site	89987712
End Site	89987944
Strand	-
Length	232
Assembly	hg38
Class	Linc;
Other Gene Versions	NONHSAG002039.1(old version)

Transcripts in Gene

NONCODE TRANSCRIPT ID

NONHSAT004387.2

Expression Profile (Data Source:Human Body Map)

adipose	adrenal	brain	brain_R	breast	colon
0	0	4.13019	0	0	0
foreskin	heart	heart_R	HLF_1	HLF_2	kidney
0	0	0	0	0	0
liver	liver_R	lung	lymphNode	ovary	placenta_R
0	0	0	0	0	0
prostate	skeltalMuscle	testes	testes_R	thyroid	whiteBloodCell
0	0	3.33883	0	0	0

Expression profile of NONHSAG002039 in Human tissues

Loading...

Exosome Expression Profile (Data Source: NCBI GEO)

A431_cellLine (Squamous Cell Carcinoma Cell Line Exosomes)	BJ_cellLine (Foreskin Fibroblast Cell Line Exosomes)	HepG2_cellLine (Hepatocellular Carcinoma Cell Line Exosomes)	HUVEC_cellLine (Human Umbilical Vein Endothelial Cell Line Exosomes)	invasive_NFPAs (Invasive Non-functional Pituitary Adenomas Exosomes)
0	0	0	0	3.45916
non-invasive_NFPAs (Non-invasive Non-functional Pituitary Adenomas Exosomes)	MCF7_cellLine (Human Breast Cancer Cell Line Exosomes)	MDA-MB-231_cellLine (Human Breast Cancer Cell Line Exosomes)	tuberculosis_patients_serum (Active Tuberculosis Patients Serum Exosomes)	normal_people_blood (Normal People Blood Exosomes)
0	0	0	5.9969	0

Loading...

Expression Profile (Data Source: Single Cell)

Conservation Info

Chordata
- Vertebrates
  - Manmals
    - Primates
      - Human
      - Chimp : chr1( len:232 )
      - Gorilla : chr1( len:232 )
      - Orangutan : chr1( len:244 )
      - Rhesus : chr1( len:230 )
    - Rodents
      - Mouse : chr5( len:305 )
      - Rat : N/A
    - Laurasiatheria
      - Pig : chr4( len:236 )^T
      - Cow : chr3( len:237 )
    - Opossum : N/A
    - Platypus : N/A
  - Birds
    - Chicken : N/A
- Actinopteryqii
  - Zebrafish : N/A

Note: T = There are transcripts in this region.

Disease related

Disease:

NONCODE ID	Gene Symbol	Disease name	Source Database	Source PMID
NONHSAG002039.2	7SK	AIDS,cardiac hypertrophy,gastric cancer	LncRNAWiki	0
NONHSAG002039.2	7SK	AIDS	LncRNADisease	20471949
NONHSAG002039.2	7SK	AIDS	LncRNADisease	21098020
NONHSAG002039.2	7SK	AIDS	LncRNADisease	20976203
NONHSAG002039.2	7SK	AIDS	LncRNADisease	21087998
NONHSAG002039.2	7SK	AIDS	LncRNADisease	22377309
NONHSAG002039.2	7SK	cancer	LncRNADisease	22377309
NONHSAG002039.2	7SK	cardiac hypertrophy	LncRNADisease	22377309
NONHSAG002039.2	7SK	gastric cancer	LncRNADisease	22488152
NONHSAG002039.2	RN7SK	human immunodeficiency virus infectious disease	LncRNADisease	21087998

Mutations:

NONCODE ID

SNP ID

GWAS trait

Source PMID

NONCODE

Introduce of NONCODE

Browse NONCODE

Search a gene/transcript

Statistics

Blast

Genome

ID Conversion

Download

Bio-tools

ncFANs

CNCI

lnc-GFP

lncRNA Analysis pipeline