Detail infomation of NONHSAG002086.3--NONCODE

Detail infomation of NONHSAG002086.3

General info

NONCODE GENE ID	NONHSAG002086.3
Chromosome	chr1
Start Site	93261701
End Site	93346434
Strand	-
Length	20482
Assembly	hg38
Class	Antisense;
Other Gene Versions	NONHSAG002086.2(old version)

Transcripts in Gene

NONCODE TRANSCRIPT ID

Expression Profile (Data Source:Human Body Map)

adipose	adrenal	brain	brain_R	breast	colon
0.0598579	0.279928	0.179988	0.246028	0.11546	0.101712
foreskin	heart	heart_R	HLF_1	HLF_2	kidney
0.059078	0.0320063	0.0895058	0.0221109	0.0979545	0.0565176
liver	liver_R	lung	lymphNode	ovary	placenta_R
0.0485115	0.00917716	0.0310973	0.0874057	0.0907865	0.0712834
prostate	skeltalMuscle	testes	testes_R	thyroid	whiteBloodCell
0.0379815	0.0206187	0.0480731	0.0878992	0.0628427	0.0352701

Expression profile of NONHSAG002086 in Human tissues

Exosome Expression Profile (Data Source: NCBI GEO)

A431_cellLine (Squamous Cell Carcinoma Cell Line Exosomes)	BJ_cellLine (Foreskin Fibroblast Cell Line Exosomes)	HepG2_cellLine (Hepatocellular Carcinoma Cell Line Exosomes)	HUVEC_cellLine (Human Umbilical Vein Endothelial Cell Line Exosomes)	invasive_NFPAs (Invasive Non-functional Pituitary Adenomas Exosomes)
2.59761	7.48084	1.24817	3.37547	3.18473
non-invasive_NFPAs (Non-invasive Non-functional Pituitary Adenomas Exosomes)	MCF7_cellLine (Human Breast Cancer Cell Line Exosomes)	MDA-MB-231_cellLine (Human Breast Cancer Cell Line Exosomes)	tuberculosis_patients_serum (Active Tuberculosis Patients Serum Exosomes)	normal_people_blood (Normal People Blood Exosomes)
3.30058	0	0	2.96969	2.54017

Expression Profile (Data Source: Single Cell)

Conservation Info

Chordata
- Vertebrates
  - Manmals
    - Primates
      - Human
      - Chimp : N/A
      - Gorilla : N/A
      - Orangutan : N/A
      - Rhesus : N/A
    - Rodents
      - Mouse : N/A
      - Rat : N/A
    - Laurasiatheria
      - Pig : N/A
      - Cow : N/A
    - Opossum : N/A
    - Platypus : N/A
  - Birds
    - Chicken : N/A
- Actinopteryqii
  - Zebrafish : N/A

Note: T = There are transcripts in this region.

Disease related

Disease:

NONCODE ID	Gene Symbol	Disease name	Source Database	Source PMID
NONHSAG002086.3	CCDC18-AS1	Adolescent Idiopathic Scoliosis	LncRNAWiki	0

Mutations:

NONCODE ID	SNP ID	GWAS trait	Source PMID
NONHSAG002086.3	rs2296558	Methylation levels at chr1:93583364-93583414 [hg18 coord, probe cg02421543] in Temporal cortex	20485568
NONHSAG002086.3	rs2296558	HDL cholesterol	20686565
NONHSAG002086.3	rs2296558	Total cholesterol	20686565
NONHSAG002086.3	rs2296558	Type 2 diabetes	22158537
NONHSAG002086.3	rs6541401	Differential splicing of TMED5 [probeset 2423272] in lymphoblastoid cell lines	19052777
NONHSAG002086.3	rs6541401	Methylation levels at chr1:93583364-93583414 [hg18 coord, probe cg02421543] in Temporal cortex	20485568
NONHSAG002086.3	rs6541401	HDL cholesterol	20686565
NONHSAG002086.3	rs6541401	Total cholesterol	20686565
NONHSAG002086.3	rs6541401	Type 2 diabetes	22158537
NONHSAG002086.3	rs6667701	Gene expression of LOC100131564 [probe 227074_at] in lymphoblastoid cell lines	17873877
NONHSAG002086.3	rs6667701	Gene expression of probe 1558237_x_at in lymphoblastoid cell lines	17873877
NONHSAG002086.3	rs6667701	Gene expression of DR1 [probe ILMN_12020] in osteoblasts treated with PGE2	21283786
NONHSAG002086.3	rs6667701	Gene expression of DR1 [probe ILMN_12020] in osteoblasts treated with dexamethasone	21283786
NONHSAG002086.3	rs6667701	Gene expression of DR1 [probe ILMN_12020] in untreated osteoblasts	21283786
NONHSAG002086.3	rs6541404	Differential splicing of TMED5 [probeset 2423272] in lymphoblastoid cell lines	19052777
NONHSAG002086.3	rs6541404	Methylation levels at chr1:93583364-93583414 [hg18 coord, probe cg02421543] in Temporal cortex	20485568
NONHSAG002086.3	rs6541404	HDL cholesterol	20686565
NONHSAG002086.3	rs6541404	Type 2 diabetes	22158537
NONHSAG002086.3	rs6541404	Total cholesterol	20686565
NONHSAG002086.3	rs2391251	HDL cholesterol	20686565
NONHSAG002086.3	rs11164890	Gene expression of DR1 in peripheral blood monocytes	20502693
NONHSAG002086.3	rs11164890	Gene expression of TMED5 in peripheral blood monocytes	20502693
NONHSAG002086.3	rs11164890	Gene expression of ZNF425 in peripheral blood monocytes	20502693
NONHSAG002086.3	rs11164890	Serum concentration of choline	21886157
NONHSAG002086.3	rs6687359	Gene expression of DR1 in peripheral blood monocytes	20502693
NONHSAG002086.3	rs6687359	Gene expression of TMED5 in peripheral blood monocytes	20502693
NONHSAG002086.3	rs6687359	Serum concentration of choline	21886157
NONHSAG002086.3	rs9432681	Differential splicing of TMED5 [probeset 2423272] in lymphoblastoid cell lines	19052777
NONHSAG002086.3	rs9432681	Methylation levels at chr1:93583364-93583414 [hg18 coord, probe cg02421543] in Temporal cortex	20485568
NONHSAG002086.3	rs9432681	HDL cholesterol	20686565
NONHSAG002086.3	rs9432681	Type 2 diabetes	22158537
NONHSAG002086.3	rs9432681	Total cholesterol	20686565
NONHSAG002086.3	rs626714	Gene expression of DR1 in peripheral blood monocytes	20502693
NONHSAG002086.3	rs626714	Gene expression of TMED5 in peripheral blood monocytes	20502693
NONHSAG002086.3	rs626714	Serum concentration of choline	21886157
NONHSAG002086.3	rs11164897	HDL cholesterol	20686565
NONHSAG002086.3	rs6680107	Differential splicing of TMED5 [probeset 2423272] in lymphoblastoid cell lines	19052777
NONHSAG002086.3	rs6680107	Methylation levels at chr1:93583364-93583414 [hg18 coord, probe cg02421543] in Temporal cortex	20485568
NONHSAG002086.3	rs6680107	HDL cholesterol	20686565
NONHSAG002086.3	rs6680107	Total cholesterol	20686565
NONHSAG002086.3	rs6680107	Type 2 diabetes	22158537
NONHSAG002086.3	rs9432453	Differential splicing of TMED5 [probeset 2423272] in lymphoblastoid cell lines	19052777
NONHSAG002086.3	rs9432453	Methylation levels at chr1:93583364-93583414 [hg18 coord, probe cg02421543] in Temporal cortex	20485568
NONHSAG002086.3	rs9432453	HDL cholesterol	20686565
NONHSAG002086.3	rs9432453	Total cholesterol	20686565
NONHSAG002086.3	rs9432453	Type 2 diabetes	22158537
NONHSAG002086.3	rs1000607	Differential splicing of TMED5 [probeset 2423272] in lymphoblastoid cell lines	19052777
NONHSAG002086.3	rs1000607	Methylation levels at chr1:93583364-93583414 [hg18 coord, probe cg02421543] in Temporal cortex	20485568
NONHSAG002086.3	rs1000607	HDL cholesterol	20686565
NONHSAG002086.3	rs1000607	Type 2 diabetes	22158537
NONHSAG002086.3	rs1000607	Total cholesterol	20686565
NONHSAG002086.3	rs4240966	Differential splicing of TMED5 [probeset 2423272] in lymphoblastoid cell lines	19052777
NONHSAG002086.3	rs4240966	Gene expression of TMED5 in blood	21829388
NONHSAG002086.3	rs4240966	Gene expression of probe 1558237_x_at in lymphoblastoid cell lines	17873877
NONHSAG002086.3	rs4240966	Methylation levels at chr1:93583364-93583414 [hg18 coord, probe cg02421543] in Temporal cortex	20485568
NONHSAG002086.3	rs4240966	Gene expression of LOC100131564 [probe 227074_at] in lymphoblastoid cell lines	17873877
NONHSAG002086.3	rs4240966	Gene expression of DR1 in blood	21829388
NONHSAG002086.3	rs4240966	HDL cholesterol	20686565
NONHSAG002086.3	rs4240966	Serum ratio of (myristate (14:0))/(palmitoleate (16:1n7))	21886157
NONHSAG002086.3	rs4240966	Gene expression of DR1 [probeset 209187_at] in sputum	21949713
NONHSAG002086.3	rs4240966	Total cholesterol	20686565
NONHSAG002086.3	rs4240966	Type 2 diabetes	22158537
NONHSAG002086.3	rs4000699	Methylation levels at chr1:93583364-93583414 [hg18 coord, probe cg02421543] in Temporal cortex	20485568
NONHSAG002086.3	rs4000699	HDL cholesterol	20686565
NONHSAG002086.3	rs4000699	Total cholesterol	20686565
NONHSAG002086.3	rs4000699	Type 2 diabetes	22158537
NONHSAG002086.3	rs6701250	Gene expression of DR1 in peripheral blood monocytes	20502693
NONHSAG002086.3	rs6701250	Gene expression of TMED5 in peripheral blood monocytes	20502693
NONHSAG002086.3	rs6701250	Differential splicing of TMED5 [probeset 2423272] in lymphoblastoid cell lines	19052777
NONHSAG002086.3	rs6701250	Serum concentration of choline	21886157
NONHSAG002086.3	rs569414	Differential splicing of TMED5 [probeset 2423272] in lymphoblastoid cell lines	19052777
NONHSAG002086.3	rs569414	Methylation levels at chr1:93583364-93583414 [hg18 coord, probe cg02421543] in Temporal cortex	20485568
NONHSAG002086.3	rs569414	HDL cholesterol	20686565
NONHSAG002086.3	rs569414	Total cholesterol	20686565
NONHSAG002086.3	rs2031225	Differential splicing of TMED5 [probeset 2423272] in lymphoblastoid cell lines	19052777
NONHSAG002086.3	rs2031225	Gene expression of DR1 in peripheral blood monocytes	20502693
NONHSAG002086.3	rs2031225	Gene expression of TMED5 in peripheral blood monocytes	20502693
NONHSAG002086.3	rs2031225	Methylation levels at chr1:93583364-93583414 [hg18 coord, probe cg02421543] in Temporal cortex	20485568
NONHSAG002086.3	rs2031225	Gene expression of SERAC1 in peripheral blood monocytes	20502693
NONHSAG002086.3	rs2031225	HDL cholesterol	20686565
NONHSAG002086.3	rs2031225	Serum ratio of (allantoin)/(thromboxane B2)	21886157
NONHSAG002086.3	rs2031226	Methylation levels at chr1:93583364-93583414 [hg18 coord, probe cg02421543] in Temporal cortex	20485568
NONHSAG002086.3	rs2031226	HDL cholesterol	20686565
NONHSAG002086.3	rs2031226	Type 2 diabetes	22158537
NONHSAG002086.3	rs2031226	Total cholesterol	20686565
NONHSAG002086.3	rs6541349	HDL cholesterol	20686565
NONHSAG002086.3	rs6703310	Differential splicing of TMED5 [probeset 2423272] in lymphoblastoid cell lines	19052777
NONHSAG002086.3	rs6703310	Gene expression of DR1 in peripheral blood monocytes	20502693
NONHSAG002086.3	rs6703310	Gene expression of TMED5 in peripheral blood monocytes	20502693
NONHSAG002086.3	rs6703310	Methylation levels at chr1:93583364-93583414 [hg18 coord, probe cg02421543] in Temporal cortex	20485568
NONHSAG002086.3	rs6703310	HDL cholesterol	20686565
NONHSAG002086.3	rs6703310	Gene expression of SERAC1 in peripheral blood monocytes	20502693
NONHSAG002086.3	rs6703310	Serum ratio of (allantoin)/(thromboxane B2)	21886157
NONHSAG002086.3	rs6703310	Total cholesterol	20686565
NONHSAG002086.3	rs6703310	Type 2 diabetes	22158537
NONHSAG002086.3	rs7555292	Gene expression of DR1 in peripheral blood monocytes	20502693
NONHSAG002086.3	rs7555292	Gene expression of TMED5 in peripheral blood monocytes	20502693
NONHSAG002086.3	rs7555292	Serum concentration of bilirubin (E,E)*	21886157
NONHSAG002086.3	rs12563120	Gene expression of DR1 in peripheral blood monocytes	20502693
NONHSAG002086.3	rs12563120	HDL cholesterol	20686565
NONHSAG002086.3	rs4847408	Differential splicing of TMED5 [probeset 2423272] in lymphoblastoid cell lines	19052777
NONHSAG002086.3	rs4847408	Gene expression of DR1 in peripheral blood monocytes	20502693
NONHSAG002086.3	rs4847408	Gene expression of TMED5 in peripheral blood monocytes	20502693
NONHSAG002086.3	rs4847408	Methylation levels at chr1:93583364-93583414 [hg18 coord, probe cg02421543] in Temporal cortex	20485568
NONHSAG002086.3	rs4847408	HDL cholesterol	20686565
NONHSAG002086.3	rs4847408	Gene expression of SERAC1 in peripheral blood monocytes	20502693
NONHSAG002086.3	rs4847408	Serum ratio of (allantoin)/(thromboxane B2)	21886157
NONHSAG002086.3	rs4847408	Total cholesterol	20686565
NONHSAG002086.3	rs2391254	Differential splicing of TMED5 [probeset 2423272] in lymphoblastoid cell lines	19052777
NONHSAG002086.3	rs2391254	Methylation levels at chr1:93583364-93583414 [hg18 coord, probe cg02421543] in Temporal cortex	20485568
NONHSAG002086.3	rs2391254	HDL cholesterol	20686565
NONHSAG002086.3	rs2391254	Type 2 diabetes	22158537
NONHSAG002086.3	rs2391254	Total cholesterol	20686565
NONHSAG002086.3	rs4847409	Gene expression of DR1 in peripheral blood monocytes	20502693
NONHSAG002086.3	rs4847409	Gene expression of TMED5 in peripheral blood monocytes	20502693
NONHSAG002086.3	rs4847409	Serum concentration of choline	21886157
NONHSAG002086.3	rs11164908	HDL cholesterol	20686565
NONHSAG002086.3	rs942196	Differential splicing of TMED5 [probeset 2423272] in lymphoblastoid cell lines	19052777
NONHSAG002086.3	rs942196	Methylation levels at chr1:93583364-93583414 [hg18 coord, probe cg02421543] in Temporal cortex	20485568
NONHSAG002086.3	rs942196	HDL cholesterol	20686565
NONHSAG002086.3	rs942196	Total cholesterol	20686565
NONHSAG002086.3	rs942196	Type 2 diabetes	22158537
NONHSAG002086.3	rs6541351	Gene expression of TMED5 in blood	21829388
NONHSAG002086.3	rs6541351	Gene expression of LOC100131564 [probe 227074_at] in lymphoblastoid cell lines	17873877
NONHSAG002086.3	rs6541351	Gene expression of probe 1558237_x_at in lymphoblastoid cell lines	17873877
NONHSAG002086.3	rs6541351	Gene expression of DR1 in blood	21829388
NONHSAG002086.3	rs10782959	Gene expression of probe 1558237_x_at in lymphoblastoid cell lines	17873877
NONHSAG002086.3	rs10782959	Gene expression of LOC100131564 [probe 227074_at] in lymphoblastoid cell lines	17873877
NONHSAG002086.3	rs10782959	Differential splicing of TMED5 [probeset 2423272] in lymphoblastoid cell lines	19052777
NONHSAG002086.3	rs10782959	Gene expression of DR1 (ENSG00000117505) in dendritic cells	22233810

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