An integrated knowledge database dedicated to ncRNAs, especially lncRNAs.
Detail infomation of NONHSAG002460.2

General info

NONCODE GENE IDNONHSAG002460.2
Chromosomechr1
Start Site113008253
End Site113047056
Strand+
Length1312
Assemblyhg38
ClassLinc;
Other Gene VersionsNONHSAG002460.3

Transcripts in Gene

NONCODE TRANSCRIPT ID
NONHSAT149620.1

Expression Profile (Data Source:Human Body Map)

adiposeadrenalbrainbrain_Rbreastcolon
foreskinheartheart_RHLF_1HLF_2kidney
liverliver_RlunglymphNodeovaryplacenta_R
prostateskeltalMuscletestestestes_RthyroidwhiteBloodCell
NA

Exosome Expression Profile (Data Source: NCBI GEO)

NA

Expression Profile (Data Source: Single Cell)

Conservation Info

  • Chordata
    • Vertebrates
      • Manmals
        • Primates
          • Human
          • Chimp : N/A
          • Gorilla : N/A
          • Orangutan : N/A
          • Rhesus : N/A
        • Rodents
          • Mouse : N/A
          • Rat : N/A
        • Laurasiatheria
          • Pig : N/A
          • Cow : N/A
        • Opossum : N/A
        • Platypus : N/A
      • Birds
        • Chicken : N/A
    • Actinopteryqii
      • Zebrafish : N/A

Note: T = There are transcripts in this region.

Disease related

Disease:

NONCODE IDGene SymbolDisease nameSource DatabaseSource PMID
NONHSAG002460.3ENST00000420168cervical cancerLnc2Cancer27363024
NONHSAG002460.3SLC16A1-AS1cervical cancerLnc2Cancer27363024

Mutations:

NONCODE IDSNP IDGWAS traitSource PMID
NONHSAG002460.3rs4839273Total cholesterol20339536
NONHSAG002460.3rs7524567Serum ratio of (gamma-glutamylglutamate)/(inositol 1-phosphate (I1P))21886157
NONHSAG002460.3rs17493859Refractive error23474815
NONHSAG002460.3rs773440Serum concentration of ascorbate (Vitamin C)21886157
NONHSAG002460.3rs773440Serum concentration of glutaroyl carnitine21886157
NONHSAG002460.3rs7545814Serum ratio of (1,5-anhydroglucitol (1,5-AG))/(gamma-glutamylglutamate)21886157
NONHSAG002460.3rs1216779Serum ratio of (levulinate (4-oxovalerate))/(phenylacetate)21886157
NONHSAG002460.3rs12129863Serum concentration of ascorbate (Vitamin C)21886157
NONHSAG002460.3rs12129863Total cholesterol20339536
NONHSAG002460.3rs11102576Total cholesterol20339536
NONHSAG002460.3rs11584535Total cholesterol20339536
NONHSAG002460.3rs2798691Serum ratio of (glutaroyl carnitine)/(kynurenine)21886157
NONHSAG002460.3rs12745675Total cholesterol20339536
NONHSAG002460.3rs12746771Total cholesterol20339536
NONHSAG002460.3rs3889656Total cholesterol20339536

  NONCODE

Introduce of NONCODE
Browse NONCODE
Search a gene/transcript
Statistics
Blast
Genome
ID Conversion
Download

  Bio-tools

ncFANs
CNCI
lnc-GFP
lncRNA Analysis pipeline