An integrated knowledge database dedicated to ncRNAs, especially lncRNAs.
Detail infomation of NONHSAG002960.1

General info

NONCODE GENE IDNONHSAG002960.1
Chromosomechr1
Start Site152902516
End Site152921686
Strand-
Length1995
Assemblyhg19
ClassLinc;
Other Gene VersionsNONHSAG002960.2

Transcripts in Gene

NONCODE TRANSCRIPT ID
NONHSAT006498.1

Expression Profile (Data Source:)

adiposeadrenalbrainbrain_Rbreastcolon
foreskinheartheart_RHLF_1HLF_2kidney
liverliver_RlunglymphNodeovaryplacenta_R
prostateskeltalMuscletestestestes_RthyroidwhiteBloodCell
NA

Exosome Expression Profile (Data Source: NCBI GEO)

NA

Expression Profile (Data Source: Single Cell)

Conservation Info

  • Chordata
    • Vertebrates
      • Manmals
        • Primates
          • Human
          • Chimp : N/A
          • Gorilla : N/A
          • Orangutan : N/A
          • Rhesus : N/A
        • Rodents
          • Mouse : N/A
          • Rat : N/A
        • Laurasiatheria
          • Pig : N/A
          • Cow : N/A
        • Opossum : N/A
        • Platypus : N/A
      • Birds
        • Chicken : N/A
    • Actinopteryqii
      • Zebrafish : N/A

Note: T = There are transcripts in this region.

Disease related

Disease:

NONCODE IDGene SymbolDisease nameSource DatabaseSource PMID
NONHSAG002960.2lnc-SPRR2D-1tongue squamous cell carcinomaLnc2Cancer25045670

Mutations:

NONCODE IDSNP IDGWAS traitSource PMID
NONHSAG002960.2rs4845497Advanced age-related macular degeneration (choroidal neovascularization) vs. no AMD23455636
NONHSAG002960.2rs4845497Autism20663923
NONHSAG002960.2rs1999885Breast cancer20852631
NONHSAG002960.2rs756303Serum ratio of (1-heptadecanoylglycerophosphocholine)/(7-methylxanthine)21886157
NONHSAG002960.2rs756303Autism20663923
NONHSAG002960.2rs2050674Serum ratio of (sebacate (decanedioate))/(thromboxane B2)21886157
NONHSAG002960.2rs2050674Advanced age-related macular degeneration (choroidal neovascularization) vs. no AMD23455636
NONHSAG002960.2rs11576457Serum concentration of 3-(4-hydroxyphenyl)lactate21886157

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