An integrated knowledge database dedicated to ncRNAs, especially lncRNAs.
Detail infomation of NONHSAG003180.1

General info

NONCODE GENE IDNONHSAG003180.1
Chromosomechr1
Start Site159165775
End Site159172599
Strand-
Length4754
Assemblyhg19
ClassLinc;
Other Gene VersionsNONHSAG003180.3

Transcripts in Gene

NONCODE TRANSCRIPT ID
NONHSAT006998.1
NONHSAT006999.1
NONHSAT007001.1

Expression Profile (Data Source:)

adiposeadrenalbrainbrain_Rbreastcolon
foreskinheartheart_RHLF_1HLF_2kidney
liverliver_RlunglymphNodeovaryplacenta_R
prostateskeltalMuscletestestestes_RthyroidwhiteBloodCell
NA

Exosome Expression Profile (Data Source: NCBI GEO)

NA

Expression Profile (Data Source: Single Cell)

Conservation Info

  • Chordata
    • Vertebrates
      • Manmals
        • Primates
          • Human
          • Chimp : N/A
          • Gorilla : N/A
          • Orangutan : N/A
          • Rhesus : N/A
        • Rodents
          • Mouse : N/A
          • Rat : N/A
        • Laurasiatheria
          • Pig : N/A
          • Cow : N/A
        • Opossum : N/A
        • Platypus : N/A
      • Birds
        • Chicken : N/A
    • Actinopteryqii
      • Zebrafish : N/A

Note: T = There are transcripts in this region.

Disease related

Disease:

NONCODE IDGene SymbolDisease nameSource DatabaseSource PMID
NONHSAG003180.3CTA-134P22.2bladder cancerLnc2Cancer24944692
NONHSAG003180.3CADM3-AS1urinary bladder cancerLnc2Cancer24944692

Mutations:

NONCODE IDSNP IDGWAS traitSource PMID
NONHSAG003180.3rs862991Gene expression of DARC in blood21829388
NONHSAG003180.3rs2852719Serum ratio of (myristoleate (14:1n5))/(valerate)21886157
NONHSAG003180.3rs3027001Monocyte count21738479
NONHSAG003180.3rs3027001IgE in plasma22075330
NONHSAG003180.3rs3027001College completion23722424
NONHSAG003180.3rs3027001Years of education23722424
NONHSAG003180.3rs3845622Years of education23722424
NONHSAG003180.3rs3845622Major depressive disorder (narrow definition) (females)20038947
NONHSAG003180.3rs3027009Lean body mass and age at menarche (combined)22744181
NONHSAG003180.3rs3027009Left arm lean body mass and age at menarche22744181
NONHSAG003180.3rs3027009Age at menarche22744181
NONHSAG003180.3rs3027009Serum concentration of eicosapentaenoate (EPA; 20:5n3)21886157
NONHSAG003180.3rs3027012Monocyte chemoattractant protein-122291609
NONHSAG003180.3rs3027012Monocyte count21738479
NONHSAG003180.3rs3027012Fasting serum MCP-1 (pg/mL) in children23251661
NONHSAG003180.3rs3027012Monocyte chemoattractant protein-1 in obese children23017229
NONHSAG003180.3rs3027012Serum concentration of 4-ethylphenylsulfate21886157
NONHSAG003180.3rs2814778White blood cell count (WBC)21738479
NONHSAG003180.3rs2814778Neutrophil count21738479
NONHSAG003180.3rs2814778White blood cell count (WBC)21153663
NONHSAG003180.3rs2814778Neutrophil count21153663
NONHSAG003180.3rs2814778Lymphocyte count21153663
NONHSAG003180.3rs2814778White blood cell count (WBC)22037903
NONHSAG003180.3rs2814778White blood cell count22037903
NONHSAG003180.3rs2814778Monocyte count21738479
NONHSAG003180.3rs2814778Basophil count21153663
NONHSAG003180.3rs2814778Neutrophil count21507922
NONHSAG003180.3rs2814778Serum myeloperoxidase levels23620142
NONHSAG003180.3rs2814778Circulating myeloperoxidase levels (serum)23620142
NONHSAG003180.3rs2814778Eosinophil count21738479
NONHSAG003180.3rs863002Fasting serum MCP-1 (pg/mL) in children23251661
NONHSAG003180.3rs863002Monocyte chemoattractant protein-1 in obese children23017229
NONHSAG003180.3rs863002Monocyte count21738479
NONHSAG003180.3rs863002Gene expression of DARC in blood21829388
NONHSAG003180.3rs863002Serum ratio of (1-arachidonoylglycerophosphoethanolamine*)/(7-methylguanine)21886157
NONHSAG003180.3rs863002Gene expression of OR10J5 in blood21829388
NONHSAG003180.3rs3027016Monocyte chemoattractant protein-1 in obese children23017229
NONHSAG003180.3rs3027016Fasting serum MCP-1 (pg/mL) in children23251661
NONHSAG003180.3rs12075Monocyte chemoattractant protein-122291609
NONHSAG003180.3rs12075Inflammatory biomarkers22291609
NONHSAG003180.3rs12075Duffy system Fya antigen22611595
NONHSAG003180.3rs12075White blood cell count (WBC)22037903
NONHSAG003180.3rs12075White blood cell count22037903
NONHSAG003180.3rs12075Gene expression of DARC in blood21829388
NONHSAG003180.3rs12075Monocyte chemoattractant protein-123017229
NONHSAG003180.3rs12075Monocyte chemoattractant protein-1 in obese children23017229
NONHSAG003180.3rs12075Fasting serum MCP-1 (pg/mL) in children23251661
NONHSAG003180.3rs12075Monocyte count21738479
NONHSAG003180.3rs12075Years of education23722424
NONHSAG003180.3rs12075College completion23722424
NONHSAG003180.3rs12075Gene expression of OR10J5 in blood21829388
NONHSAG003180.3rs12075Type 2 diabetes23209189
NONHSAG003180.3rs13962IgE levels22075330
NONHSAG003180.3rs13962IgE in plasma22075330
NONHSAG003180.3rs13962C-reactive protein (CRP)21300955
NONHSAG003180.3rs13962College completion23722424
NONHSAG003180.3rs13962Total serum IgE23146381
NONHSAG003180.3rs13962Years of education23722424
NONHSAG003180.3rs863006Fasting serum MCP-1 (pg/mL) in children23251661
NONHSAG003180.3rs863006Monocyte chemoattractant protein-1 in obese children23017229

  NONCODE

Introduce of NONCODE
Browse NONCODE
Search a gene/transcript
Statistics
Blast
Genome
ID Conversion
Download

  Bio-tools

ncFANs
CNCI
lnc-GFP
lncRNA Analysis pipeline