An integrated knowledge database dedicated to ncRNAs, especially lncRNAs.
Detail infomation of NONHSAG003514.1

General info

NONCODE GENE IDNONHSAG003514.1
Chromosomechr1
Start Site174083005
End Site174129142
Strand-
Length2958
Assemblyhg19
ClassAntisense;
Other Gene VersionsNONHSAG003514.3

Transcripts in Gene

NONCODE TRANSCRIPT ID
NONHSAT007721.1
NONHSAT007722.1
NONHSAT007723.1
NONHSAT007724.1
NONHSAT007725.1
NONHSAT007726.1

Expression Profile (Data Source:)

adiposeadrenalbrainbrain_Rbreastcolon
foreskinheartheart_RHLF_1HLF_2kidney
liverliver_RlunglymphNodeovaryplacenta_R
prostateskeltalMuscletestestestes_RthyroidwhiteBloodCell
NA

Exosome Expression Profile (Data Source: NCBI GEO)

NA

Expression Profile (Data Source: Single Cell)

Conservation Info

  • Chordata
    • Vertebrates
      • Manmals
        • Primates
          • Human
          • Chimp : N/A
          • Gorilla : N/A
          • Orangutan : N/A
          • Rhesus : N/A
        • Rodents
          • Mouse : N/A
          • Rat : N/A
        • Laurasiatheria
          • Pig : N/A
          • Cow : N/A
        • Opossum : N/A
        • Platypus : N/A
      • Birds
        • Chicken : N/A
    • Actinopteryqii
      • Zebrafish : N/A

Note: T = There are transcripts in this region.

Disease related

Disease:

NONCODE IDGene SymbolDisease nameSource DatabaseSource PMID
NONHSAG003514.3RP11-160H22.5hepatocellular carcinomaLnc2Cancer25714016

Mutations:

NONCODE IDSNP IDGWAS traitSource PMID
NONHSAG003514.3rs16846683Methylation levels at chr1:172153634-172153684 [hg18 coord, probe cg14047008] in Temporal cortex20485568
NONHSAG003514.3rs16846683Methylation levels at chr1:172153634-172153684 [hg18 coord, probe cg14047008] in Caudal pons20485568
NONHSAG003514.3rs17350991Migraine without aura22683712
NONHSAG003514.3rs4650945Differential exon level expression of RABGAP1L [probe 2367974] in peripheral blood mononuclear cells19222302
NONHSAG003514.3rs4650945Bipolar disorder22182935
NONHSAG003514.3rs17353212Serum concentration of asparagine21886157
NONHSAG003514.3rs16846688Methylation levels at chr1:172153634-172153684 [hg18 coord, probe cg14047008] in Caudal pons20485568
NONHSAG003514.3rs16846688Methylation levels at chr1:172153634-172153684 [hg18 coord, probe cg14047008] in Temporal cortex20485568
NONHSAG003514.3rs1407126Methylation levels at chr1:172153634-172153684 [hg18 coord, probe cg14047008] in Caudal pons20485568
NONHSAG003514.3rs1407126Methylation levels at chr1:172153634-172153684 [hg18 coord, probe cg14047008] in Temporal cortex20485568
NONHSAG003514.3rs1407127Differential exon level expression of RABGAP1L [probe 2367974] in brain cortex19222302
NONHSAG003514.3rs1407127Differential exon level expression of RABGAP1L [probe 2367974] in peripheral blood mononuclear cells19222302
NONHSAG003514.3rs1407127Gene expression of RABGAP1L in peripheral blood monocytes20502693
NONHSAG003514.3rs1407127Gene expression of MRPS14 probe [GI_11559926-S] in brain cortex with no Alzheimer's interaction19361613
NONHSAG003514.3rs1407127Lumiracoxib-related liver injury (measured by elevated liver enzymes)20639878
NONHSAG003514.3rs1407127Serum ratio of (arginine)/(gamma-glutamylthreonine*)21886157
NONHSAG003514.3rs1407127Serum concentration of asparagine21886157
NONHSAG003514.3rs12085290Bipolar disorder22182935
NONHSAG003514.3rs6676161Gene expression of RABGAP1L in peripheral blood monocytes20502693
NONHSAG003514.3rs6676161Gene expression of MRPS14 probe [GI_11559926-S] in brain cortex with no Alzheimer's interaction19361613
NONHSAG003514.3rs6676161Lumiracoxib-related liver injury (measured by elevated liver enzymes)20639878
NONHSAG003514.3rs6676161Serum concentration of asparagine21886157
NONHSAG003514.3rs6670425Gene expression of GPR52 in normal prepouch ileum23474282
NONHSAG003514.3rs6670425Gene expression of RABGAP1L in normal prepouch ileum23474282
NONHSAG003514.3rs6696076Autism with low IQ20663923
NONHSAG003514.3rs6425275Methylation levels at chr1:172153634-172153684 [hg18 coord, probe cg14047008] in Temporal cortex20485568
NONHSAG003514.3rs6425275Methylation levels at chr1:172153634-172153684 [hg18 coord, probe cg14047008] in Caudal pons20485568
NONHSAG003514.3rs6681627Transmission distortion22377632
NONHSAG003514.3rs6681627Paternal transmission distortion22377632
NONHSAG003514.3rs10912735Differential exon level expression of RABGAP1L [probe 2367974] in brain cortex19222302
NONHSAG003514.3rs10912735Gene expression of GPR52 in normal prepouch ileum23474282
NONHSAG003514.3rs10912735Differential exon level expression of RABGAP1L [probe 2367974] in peripheral blood mononuclear cells19222302
NONHSAG003514.3rs10912735Gene expression of RABGAP1L in normal prepouch ileum23474282
NONHSAG003514.3rs10912735Serum ratio of (arginine)/(gamma-glutamylthreonine*)21886157

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