Detail infomation of NONHSAG004026.3--NONCODE

An integrated knowledge database dedicated to ncRNAs, especially lncRNAs.

Detail infomation of NONHSAG004026.3

General info

NONCODE GENE ID	NONHSAG004026.3
Chromosome	chr1
Start Site	204368429
End Site	204369808
Strand	-
Length	1379
Assembly	hg38
Class	Linc;
Other Gene Versions	NONHSAG004026.1(old version)

Transcripts in Gene

NONCODE TRANSCRIPT ID

NONHSAT227486.1

NONHSAT008940.2

Expression Profile (Data Source:Human Body Map)

adipose	adrenal	brain	brain_R	breast	colon
0.0872995	0.478205	0.361354	0.27411	0.818757	0.047136
foreskin	heart	heart_R	HLF_1	HLF_2	kidney
0.0848524	0.0691299	0.225129	0.0678462	0.179376	0.427931
liver	liver_R	lung	lymphNode	ovary	placenta_R
0.25955	0.0867001	0.344787	1.02204	0.124647	0.629428
prostate	skeltalMuscle	testes	testes_R	thyroid	whiteBloodCell
0	0.176764	0.0932366	0.190936	0.0692744	0.266343

Expression profile of NONHSAG004026 in Human tissues

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Exosome Expression Profile (Data Source: NCBI GEO)

A431_cellLine (Squamous Cell Carcinoma Cell Line Exosomes)	BJ_cellLine (Foreskin Fibroblast Cell Line Exosomes)	HepG2_cellLine (Hepatocellular Carcinoma Cell Line Exosomes)	HUVEC_cellLine (Human Umbilical Vein Endothelial Cell Line Exosomes)	invasive_NFPAs (Invasive Non-functional Pituitary Adenomas Exosomes)
0	0.141543	5.99827	3.05459	10.121
non-invasive_NFPAs (Non-invasive Non-functional Pituitary Adenomas Exosomes)	MCF7_cellLine (Human Breast Cancer Cell Line Exosomes)	MDA-MB-231_cellLine (Human Breast Cancer Cell Line Exosomes)	tuberculosis_patients_serum (Active Tuberculosis Patients Serum Exosomes)	normal_people_blood (Normal People Blood Exosomes)
5.78091	0	0	9.41283	0

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Expression Profile (Data Source: Single Cell)

Conservation Info

Chordata
- Vertebrates
  - Manmals
    - Primates
      - Human
      - Chimp : chr1( len:1378 )^T
      - Gorilla : chr1( len:1378 )
      - Orangutan : chr1( len:1376 )
      - Rhesus : chr1( len:1377 )
    - Rodents
      - Mouse : chr1( len:1826 )^T
      - Rat : N/A
    - Laurasiatheria
      - Pig : chr9( len:1647 )
      - Cow : chr16( len:1344 )
    - Opossum : N/A
    - Platypus : N/A
  - Birds
    - Chicken : N/A
- Actinopteryqii
  - Zebrafish : N/A

Note: T = There are transcripts in this region.

Disease related

Disease:

NONCODE ID	Gene Symbol	Disease name	Source Database	Source PMID
NONHSAG004026.3	LINC00628	cancer	LncRNAWiki	0
NONHSAG004026.3	LINC00628	stomach cancer	Lnc2Cancer	27272474
NONHSAG004026.3	LINC00628	gastric cancer	Lnc2Cancer	27272474

Mutations:

NONCODE ID	SNP ID	GWAS trait	Source PMID
NONHSAG004026.3	rs2942138	Years of education	23722424
NONHSAG004026.3	rs2942138	Serum concentration of laurate (12:0)	21886157
NONHSAG004026.3	rs6691293	Gene expression of GOLT1A in blood	21829388

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