An integrated knowledge database dedicated to ncRNAs, especially lncRNAs.
Detail infomation of NONHSAG004410.1

General info

NONCODE GENE IDNONHSAG004410.1
Chromosomechr1
Start Site223988478
End Site223990925
Strand-
Length1067
Assemblyhg19
ClassLinc;
Other Gene VersionsNONHSAG004410.2

Transcripts in Gene

NONCODE TRANSCRIPT ID
NONHSAT009746.1
NONHSAT009747.1

Expression Profile (Data Source:)

adiposeadrenalbrainbrain_Rbreastcolon
foreskinheartheart_RHLF_1HLF_2kidney
liverliver_RlunglymphNodeovaryplacenta_R
prostateskeltalMuscletestestestes_RthyroidwhiteBloodCell
NA

Exosome Expression Profile (Data Source: NCBI GEO)

NA

Expression Profile (Data Source: Single Cell)

Conservation Info

  • Chordata
    • Vertebrates
      • Manmals
        • Primates
          • Human
          • Chimp : N/A
          • Gorilla : N/A
          • Orangutan : N/A
          • Rhesus : N/A
        • Rodents
          • Mouse : N/A
          • Rat : N/A
        • Laurasiatheria
          • Pig : N/A
          • Cow : N/A
        • Opossum : N/A
        • Platypus : N/A
      • Birds
        • Chicken : N/A
    • Actinopteryqii
      • Zebrafish : N/A

Note: T = There are transcripts in this region.

Disease related

Disease:

NONCODE IDGene SymbolDisease nameSource DatabaseSource PMID
NONHSAG004410.2TP53prostate cancer19269198
NONHSAG004410.2TP53prostate cancer7515114
NONHSAG004410.2TP53stomach cancer8608554
NONHSAG004410.2TP53esophageal carcinoma1519662
NONHSAG004410.2TP53endometrial cancer8517643
NONHSAG004410.2TP53breast cancer12094546
NONHSAG004410.2TP53malignant mesothelioma1913660
NONHSAG004410.2TP53pancreatic cancer15293347
NONHSAG004410.2TP53ovarian cancer9149021
NONHSAG004410.2TP53ovarian cancer8895543
NONHSAG004410.2TP53ovarian cancer11500921
NONHSAG004410.2TP53glioblastoma multiforme18349850
NONHSAG004410.2TP53adrenal gland cancer9972675
NONHSAG004410.2TP53cervical cancer11485021
NONHSAG004410.2TP53renal cell carcinoma7882775
NONHSAG004410.2TP53esophageal cancer8055646
NONHSAG004410.2TP53head and neck squamous cell carcinoma15293347
NONHSAG004410.2TP53head and neck squamous cell carcinoma17215121
NONHSAG004410.2TP53hepatocellular carcinoma18519672
NONHSAG004410.2TP53hepatocellular carcinoma16088946
NONHSAG004410.2TP53colorectal cancer15553822

Mutations:

NONCODE IDSNP IDGWAS traitSource PMID
NONHSAG004410.2rs12088254Methylation levels at chr5:148910567-148910617 [hg18 coord, probe cg05607472] in Temporal cortex20485568
NONHSAG004410.2rs12088254Serum concentration of 1-palmitoylglycerophosphocholine21886157
NONHSAG004410.2rs6685557Methylation levels at chr5:148910567-148910617 [hg18 coord, probe cg05607472] in Temporal cortex20485568
NONHSAG004410.2rs1153942UGCGL2 gene expression in lymphoblastoid cell lines19898621
NONHSAG004410.2rs1153942Serum ratio of (alpha-ketoglutarate)/(inosine)21886157
NONHSAG004410.2rs1153942Response to cytidine analogues (gemcitabine)24483146
NONHSAG004410.2rs1153942Gemcitabine toxicity as measured by gemcitabine IC50 in lymphoblastoid cell lines19898621
NONHSAG004410.2rs16842229Methylation levels at chr5:148910567-148910617 [hg18 coord, probe cg05607472] in Temporal cortex20485568
NONHSAG004410.2rs1222121Serum ratio of (glycerol 2-phosphate)/(stearidonate (18:4n3))21886157
NONHSAG004410.2rs1153937Gene expression of C11orf53 in liver18462017
NONHSAG004410.2rs1153937Gene expression of TP53BP2 in liver18462017
NONHSAG004410.2rs1153937Gene expression of AK091031 in liver18462017
NONHSAG004410.2rs1153937Gene expression of GABRR2 in liver18462017
NONHSAG004410.2rs1153937Serum ratio of (nonadecanoate (19:0))/(sebacate (decanedioate))21886157
NONHSAG004410.2rs1153937Gene expression of AK094916 in liver18462017
NONHSAG004410.2rs16842257Methylation levels at chr5:148910567-148910617 [hg18 coord, probe cg05607472] in Temporal cortex20485568
NONHSAG004410.2rs12059770Methylation levels at chr5:148910567-148910617 [hg18 coord, probe cg05607472] in Temporal cortex20485568

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