Detail infomation of NONHSAG004990.2--NONCODE

An integrated knowledge database dedicated to ncRNAs, especially lncRNAs.

Detail infomation of NONHSAG004990.2

General info

NONCODE GENE ID	NONHSAG004990.2
Chromosome	chr10
Start Site	1526629
End Site	1557485
Strand	+
Length	1886
Assembly	hg38
Class	Linc;
Other Gene Versions	NONHSAG004990.1(old version)

Transcripts in Gene

NONCODE TRANSCRIPT ID

NONHSAT010932.2

NONHSAT010933.2

NONHSAT010934.2

NONHSAT010935.2

Expression Profile (Data Source:Human Body Map)

adipose	adrenal	brain	brain_R	breast	colon
0.0100063	0	0.0156421	0.0239307	0	0
foreskin	heart	heart_R	HLF_1	HLF_2	kidney
0	0	0	0	0	0
liver	liver_R	lung	lymphNode	ovary	placenta_R
0	0	0.0410624	0	0	0
prostate	skeltalMuscle	testes	testes_R	thyroid	whiteBloodCell
0	0	0	0	0	0

Expression profile of NONHSAG004990 in Human tissues

Loading...

Exosome Expression Profile (Data Source: NCBI GEO)

A431_cellLine (Squamous Cell Carcinoma Cell Line Exosomes)	BJ_cellLine (Foreskin Fibroblast Cell Line Exosomes)	HepG2_cellLine (Hepatocellular Carcinoma Cell Line Exosomes)	HUVEC_cellLine (Human Umbilical Vein Endothelial Cell Line Exosomes)	invasive_NFPAs (Invasive Non-functional Pituitary Adenomas Exosomes)
0	0	0	0	5.67687
non-invasive_NFPAs (Non-invasive Non-functional Pituitary Adenomas Exosomes)	MCF7_cellLine (Human Breast Cancer Cell Line Exosomes)	MDA-MB-231_cellLine (Human Breast Cancer Cell Line Exosomes)	tuberculosis_patients_serum (Active Tuberculosis Patients Serum Exosomes)	normal_people_blood (Normal People Blood Exosomes)
6.40739	0	0	13.2844	0

Loading...

Expression Profile (Data Source: Single Cell)

Conservation Info

Chordata
- Vertebrates
  - Manmals
    - Primates
      - Human
      - Chimp : N/A
      - Gorilla : chr10( len:32964 )^T
      - Orangutan : N/A
      - Rhesus : N/A
    - Rodents
      - Mouse : N/A
      - Rat : N/A
    - Laurasiatheria
      - Pig : N/A
      - Cow : N/A
    - Opossum : N/A
    - Platypus : N/A
  - Birds
    - Chicken : N/A
- Actinopteryqii
  - Zebrafish : N/A

Note: T = There are transcripts in this region.

Disease related

Disease:

NONCODE ID	Gene Symbol	Disease name	Source Database	Source PMID
NONHSAG004990.2	ADARB2-AS1	temporal lobe epilepsy		25552301

Mutations:

NONCODE ID	SNP ID	GWAS trait	Source PMID
NONHSAG004990.2	rs7082213	Triglycerides in genotype 1 chronic hepatitis C virus (HCV)	22497812
NONHSAG004990.2	rs12411802	Gene expression of ITGA10 in peripheral blood monocytes	20502693
NONHSAG004990.2	rs12411802	Gene expression of ADARB2 in blood	21829388
NONHSAG004990.2	rs10751802	Transmission distortion	22377632
NONHSAG004990.2	rs10751802	Maternal transmission distortion	22377632
NONHSAG004990.2	rs10751802	Gene expression of EGR1 in peripheral blood monocytes	20502693
NONHSAG004990.2	rs2813354	Lung function, ratio of forced expiratory volume in 1 second (FEV1) to forced vital capacity (FVC) (FEV1/FVC)	20010835
NONHSAG004990.2	rs10903481	Type 1 diabetes, Rheumatoid arthritis, Crohn's disease, combined case analysis	17554300
NONHSAG004990.2	rs10903481	Multiple complex diseases	17554300
NONHSAG004990.2	rs4528239	Gene expression of ADARB2 in blood	21829388

NONCODE

Introduce of NONCODE

Browse NONCODE

Search a gene/transcript

Statistics

Blast

Genome

ID Conversion

Download

Bio-tools

ncFANs

CNCI

lnc-GFP

lncRNA Analysis pipeline