Detail infomation of NONHSAG005073.3--NONCODE

An integrated knowledge database dedicated to ncRNAs, especially lncRNAs.

Detail infomation of NONHSAG005073.3

General info

NONCODE GENE ID	NONHSAG005073.3
Chromosome	chr10
Start Site	4655426
End Site	4683084
Strand	+
Length	10124
Assembly	hg38
Class	Linc;
Other Gene Versions	NONHSAG005073.2(old version)

Transcripts in Gene

NONCODE TRANSCRIPT ID

NONHSAT154997.1

NONHSAT154998.1

NONHSAT227912.1

NONHSAT227913.1

NONHSAT227914.1

NONHSAT227915.1

NONHSAT227916.1

NONHSAT011109.2

NONHSAT011110.2

NONHSAT011111.2

Expression Profile (Data Source:Human Body Map)

adipose	adrenal	brain	brain_R	breast	colon
0.00774266	0	0	0	0.0088674	0
foreskin	heart	heart_R	HLF_1	HLF_2	kidney
0	0.0224566	0	0.01064	0	0
liver	liver_R	lung	lymphNode	ovary	placenta_R
0.00505123	0	0	0	0	0
prostate	skeltalMuscle	testes	testes_R	thyroid	whiteBloodCell
0.00203348	0	0.0035431	0.024452	0.00938549	0

Expression profile of NONHSAG005073 in Human tissues

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Exosome Expression Profile (Data Source: NCBI GEO)

A431_cellLine (Squamous Cell Carcinoma Cell Line Exosomes)	BJ_cellLine (Foreskin Fibroblast Cell Line Exosomes)	HepG2_cellLine (Hepatocellular Carcinoma Cell Line Exosomes)	HUVEC_cellLine (Human Umbilical Vein Endothelial Cell Line Exosomes)	invasive_NFPAs (Invasive Non-functional Pituitary Adenomas Exosomes)
1.31381	0.345064	0.742931	12.4569	2.93369
non-invasive_NFPAs (Non-invasive Non-functional Pituitary Adenomas Exosomes)	MCF7_cellLine (Human Breast Cancer Cell Line Exosomes)	MDA-MB-231_cellLine (Human Breast Cancer Cell Line Exosomes)	tuberculosis_patients_serum (Active Tuberculosis Patients Serum Exosomes)	normal_people_blood (Normal People Blood Exosomes)
2.64036	0	0	3.303	0

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Expression Profile (Data Source: Single Cell)

Conservation Info

Chordata
- Vertebrates
  - Manmals
    - Primates
      - Human
      - Chimp : chr10( len:27712 )^T
      - Gorilla : chr10( len:27403 )
      - Orangutan : chr10( len:27809 )^T
      - Rhesus : chr9( len:28056 )
    - Rodents
      - Mouse : N/A
      - Rat : N/A
    - Laurasiatheria
      - Pig : N/A
      - Cow : N/A
    - Opossum : N/A
    - Platypus : N/A
  - Birds
    - Chicken : N/A
- Actinopteryqii
  - Zebrafish : N/A

Note: T = There are transcripts in this region.

Disease related

Disease:

NONCODE ID	Gene Symbol	Disease name	Source Database	Source PMID
NONHSAG005073.3	LINC00705	breast cancer	LncRNAWiki	0

Mutations:

NONCODE ID	SNP ID	GWAS trait	Source PMID
NONHSAG005073.3	rs11252648	HOMA-IR	20081858
NONHSAG005073.3	rs11252650	Radiation response to therapy (radiation AUC)	20923822
NONHSAG005073.3	rs11252651	Tardive dyskinesia	19875103
NONHSAG005073.3	rs2165953	Sedentary activity (min/d) by accelerometry in children	23251661
NONHSAG005073.3	rs2165953	Obesity-related traits	23251661
NONHSAG005073.3	rs1391511	Cardiac neonatal lupus	20662065
NONHSAG005073.3	rs1391511	Neonatal lupus	20662065
NONHSAG005073.3	rs1391511	Lung function, ratio of forced expiratory volume in 1 second (FEV1) to forced vital capacity (FVC) (FEV1/FVC) ratio percent predicted (in nonasthmatic participants)	22424883
NONHSAG005073.3	rs1391511	Decrease in FEV1/FVC ratio (in nonasthmatic participants)	22424883
NONHSAG005073.3	rs1391511	Decrease in FEV1/FVC ratio (in nonasthmatic and asthmatic participants)	22424883
NONHSAG005073.3	rs1391511	Methotrexate clearance (acute lymphoblastic leukemia)	23233662
NONHSAG005073.3	rs1391511	Anti-TNF treatment response in rheumatoid arthritis (by DAS-28 score change at 3 months)	23233654
NONHSAG005073.3	rs11252655	Body mass index (BMI)	21935397

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