Detail infomation of NONHSAG005407.2--NONCODE

An integrated knowledge database dedicated to ncRNAs, especially lncRNAs.

Detail infomation of NONHSAG005407.2

General info

NONCODE GENE ID	NONHSAG005407.2
Chromosome	chr10
Start Site	24247121
End Site	24256047
Strand	+
Length	2208
Assembly	hg38
Class	Linc;
Other Gene Versions	NONHSAG005407.1(old version)

Transcripts in Gene

NONCODE TRANSCRIPT ID

NONHSAT155225.1

NONHSAT011776.2

NONHSAT011777.2

Expression Profile (Data Source:Human Body Map)

adipose	adrenal	brain	brain_R	breast	colon
0	0	0.013087	3.66661e-08	0	0
foreskin	heart	heart_R	HLF_1	HLF_2	kidney
0	0	0	0	0	0
liver	liver_R	lung	lymphNode	ovary	placenta_R
0	0	0	0	0	0
prostate	skeltalMuscle	testes	testes_R	thyroid	whiteBloodCell
0	0	0	3.07914e-07	0	0

Expression profile of NONHSAG005407 in Human tissues

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Exosome Expression Profile (Data Source: NCBI GEO)

A431_cellLine (Squamous Cell Carcinoma Cell Line Exosomes)	BJ_cellLine (Foreskin Fibroblast Cell Line Exosomes)	HepG2_cellLine (Hepatocellular Carcinoma Cell Line Exosomes)	HUVEC_cellLine (Human Umbilical Vein Endothelial Cell Line Exosomes)	invasive_NFPAs (Invasive Non-functional Pituitary Adenomas Exosomes)
0	0.547232	0	0.148968	2.19376
non-invasive_NFPAs (Non-invasive Non-functional Pituitary Adenomas Exosomes)	MCF7_cellLine (Human Breast Cancer Cell Line Exosomes)	MDA-MB-231_cellLine (Human Breast Cancer Cell Line Exosomes)	tuberculosis_patients_serum (Active Tuberculosis Patients Serum Exosomes)	normal_people_blood (Normal People Blood Exosomes)
2.67919	0	0	2.52554	0

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Expression Profile (Data Source: Single Cell)

Conservation Info

Chordata
- Vertebrates
  - Manmals
    - Primates
      - Human
      - Chimp : N/A
      - Gorilla : chr10( len:8924 )
      - Orangutan : chr10( len:9493 )^T
      - Rhesus : N/A
    - Rodents
      - Mouse : N/A
      - Rat : N/A
    - Laurasiatheria
      - Pig : N/A
      - Cow : N/A
    - Opossum : N/A
    - Platypus : N/A
  - Birds
    - Chicken : N/A
- Actinopteryqii
  - Zebrafish : N/A

Note: T = There are transcripts in this region.

Disease related

Disease:

NONCODE ID	Gene Symbol	Disease name	Source Database	Source PMID
NONHSAG005407.2	PRINS	prostate cancer	Lnc2Cancer	23728290
NONHSAG005407.2	PRINS	psoriasis	LncRNADisease	24115003
NONHSAG005407.2	PRINS	psoriasis	LncRNAWiki	0
NONHSAG005407.2	PRINS	psoriasis	LncRNADisease	15855153
NONHSAG005407.2	PRINS	psoriasis	LncRNADisease	20377629

Mutations:

NONCODE ID	SNP ID	GWAS trait	Source PMID
NONHSAG005407.2	rs3814686	C-Reactive Protein	0
NONHSAG005407.2	rs1138002	Glutamine:Pyroglutamate	21572414
NONHSAG005407.2	rs12573113	Gene expression of CLRN3 in peripheral blood monocytes	20502693

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