An integrated knowledge database dedicated to ncRNAs, especially lncRNAs.
Detail infomation of NONHSAG005499.3

General info

NONCODE GENE IDNONHSAG005499.3
Chromosomechr10
Start Site29409401
End Site29487856
Strand+
Length17032
Assemblyhg38
ClassLinc;
Other Gene VersionsNONHSAG005499.2(old version)

Transcripts in Gene

NONCODE TRANSCRIPT ID
NONHSAT155291.1
NONHSAT155292.1
NONHSAT155293.1
NONHSAT155294.1
NONHSAT155295.1
NONHSAT155296.1
NONHSAT228113.1
NONHSAT228117.1
NONHSAT012518.2
NONHSAT012519.2
NONHSAT012522.2
NONHSAT012523.2
NONHSAT012524.2
NONHSAT012525.2
NONHSAT012527.2
NONHSAT012528.2
NONHSAT012534.2

Expression Profile (Data Source:Human Body Map)

adiposeadrenalbrainbrain_Rbreastcolon
0.000242190.001513320.0002441940.005900370.001568890
foreskinheartheart_RHLF_1HLF_2kidney
0.001946954.24963e-05000.0008938250.000493247
liverliver_RlunglymphNodeovaryplacenta_R
0.002518670.001524940.0004385810.0030880.0006897760.000905955
prostateskeltalMuscletestestestes_RthyroidwhiteBloodCell
0.01008885.8267e-050.04639330.138510.003316649.76681e-12
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Exosome Expression Profile (Data Source: NCBI GEO)

A431_cellLine
(Squamous Cell Carcinoma Cell Line Exosomes)		BJ_cellLine
(Foreskin Fibroblast Cell Line Exosomes)		HepG2_cellLine
(Hepatocellular Carcinoma Cell Line Exosomes)		HUVEC_cellLine
(Human Umbilical Vein Endothelial Cell Line Exosomes)		invasive_NFPAs
(Invasive Non-functional Pituitary Adenomas Exosomes)
4.6856726.05945.1497734.48643.5117
non-invasive_NFPAs
(Non-invasive Non-functional Pituitary Adenomas Exosomes)		MCF7_cellLine
(Human Breast Cancer Cell Line Exosomes)		MDA-MB-231_cellLine
(Human Breast Cancer Cell Line Exosomes)		tuberculosis_patients_serum
(Active Tuberculosis Patients Serum Exosomes)		normal_people_blood
(Normal People Blood Exosomes)
3.75553004.690556.47177
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Expression Profile (Data Source: Single Cell)

Conservation Info

  • Chordata
    • Vertebrates
      • Manmals
        • Primates
          • Human
          • Chimp : N/A
          • Gorilla : N/A
          • Orangutan : N/A
          • Rhesus : N/A
        • Rodents
          • Mouse : N/A
          • Rat : N/A
        • Laurasiatheria
          • Pig : N/A
          • Cow : N/A
        • Opossum : N/A
        • Platypus : N/A
      • Birds
        • Chicken : N/A
    • Actinopteryqii
      • Zebrafish : N/A

Note: T = There are transcripts in this region.

Disease related

Disease:

NONCODE IDGene SymbolDisease nameSource DatabaseSource PMID
NONHSAG005499.3SVIL-AS1rheumatoid arthritisLncRNAWiki0

Mutations:

NONCODE IDSNP IDGWAS traitSource PMID
NONHSAG005499.3rs7921051Gene expression of CECR7 in peripheral blood monocytes20502693
NONHSAG005499.3rs7921051Gene expression of TRPC4 in peripheral blood monocytes20502693
NONHSAG005499.3rs7073366Gene expression of LOC387647 in CEU-CHB-JPT-YRI lymphoblastoid cell lines17873874
NONHSAG005499.3rs6481586Gene expression of LOC387647 in CEU-CHB-JPT lymphoblastoid cell lines17873874
NONHSAG005499.3rs7902800Gene expression of LOC387647 in CHB-JPT lymphoblastoid cell lines17873874
NONHSAG005499.3rs10826616Gene expression of LOC387647 in CEU-CHB-JPT-YRI lymphoblastoid cell lines17873874
NONHSAG005499.3rs7086784Gene expression of LOC387647 in CHB lymphoblastoid cell lines17873874
NONHSAG005499.3rs2182400Gene expression of CECR7 in peripheral blood monocytes20502693
NONHSAG005499.3rs2182400Gene expression of LOC387647 in CEU-CHB-JPT-YRI lymphoblastoid cell lines17873874
NONHSAG005499.3rs11816750Gene expression of CECR7 in peripheral blood monocytes20502693
NONHSAG005499.3rs11816750Gene expression of TRPC4 in peripheral blood monocytes20502693
NONHSAG005499.3rs11600Gene expression of CECR7 in peripheral blood monocytes20502693
NONHSAG005499.3rs11600Gene expression of TRPC4 in peripheral blood monocytes20502693
NONHSAG005499.3rs4749421Gene expression of CECR7 in peripheral blood monocytes20502693
NONHSAG005499.3rs4749421Gene expression of LOC387647 in CEU-CHB-JPT lymphoblastoid cell lines17873874
NONHSAG005499.3rs4749421Gene expression of FAM134C in peripheral blood monocytes20502693
NONHSAG005499.3rs4749422Gene expression of LOC387647 in CHB-JPT lymphoblastoid cell lines17873874
NONHSAG005499.3rs10763716Gene expression of LOC387647 in CEU-CHB-JPT-YRI lymphoblastoid cell lines17873874
NONHSAG005499.3rs10763717Gene expression of LOC387647 in CEU-CHB-JPT-YRI lymphoblastoid cell lines17873874
NONHSAG005499.3rs10826617Gene expression of LOC387647 in CEU-CHB-JPT-YRI lymphoblastoid cell lines17873874
NONHSAG005499.3rs10826617Gene expression of LOC387647 [probe 228786_at] in lymphoblastoid cell lines17873877
NONHSAG005499.3rs10826617Gene expression of SVIL in blood21829388
NONHSAG005499.3rs10826617Gene expression of LOC387647 [probeset 228786_at] in sputum21949713
NONHSAG005499.3rs7081352Gene expression of LOC387647 in CEU-CHB-JPT-YRI lymphoblastoid cell lines17873874
NONHSAG005499.3rs7081352Gene expression of LOC387647 [probe 228786_at] in lymphoblastoid cell lines17873877
NONHSAG005499.3rs7081352Gene expression of SVIL in blood21829388
NONHSAG005499.3rs7081352Gene expression of LOC387647 [probeset 228786_at] in sputum21949713
NONHSAG005499.3rs7078150Gene expression of LOC387647 in CEU-CHB-JPT-YRI lymphoblastoid cell lines17873874
NONHSAG005499.3rs10082484Gene expression of CECR7 in peripheral blood monocytes20502693
NONHSAG005499.3rs10082484Gene expression of LOC387647 in CEU-CHB-JPT-YRI lymphoblastoid cell lines17873874
NONHSAG005499.3rs8317Gene expression of LOC387647 in CHB lymphoblastoid cell lines17873874
NONHSAG005499.3rs4747656Gene expression of LOC387647 in CEU-CHB-JPT-YRI lymphoblastoid cell lines17873874
NONHSAG005499.3rs7898854Gene expression of CECR7 in peripheral blood monocytes20502693
NONHSAG005499.3rs7898854Gene expression of TRPC4 in peripheral blood monocytes20502693
NONHSAG005499.3rs7898854Barnes Akathisia Rating Scale19875103
NONHSAG005499.3rs4749423Gene expression of CECR7 in peripheral blood monocytes20502693
NONHSAG005499.3rs4749423Gene expression of LOC387647 in CEU-CHB-JPT-YRI lymphoblastoid cell lines17873874
NONHSAG005499.3rs4749423Gene expression of SVIL in peripheral blood monocytes20502693
NONHSAG005499.3rs4749424Gene expression of LOC387647 in CEU-CHB-JPT-YRI lymphoblastoid cell lines17873874
NONHSAG005499.3rs7077629Gene expression of LOC387647 in CEU-CHB-JPT-YRI lymphoblastoid cell lines17873874
NONHSAG005499.3rs4749429Gene expression of LOC387647 in CHB-JPT lymphoblastoid cell lines17873874
NONHSAG005499.3rs2368411Gene expression of LOC387647 in CEU-CHB-JPT-YRI lymphoblastoid cell lines17873874
NONHSAG005499.3rs11007591Gene expression of LOC387647 in CHB-JPT lymphoblastoid cell lines17873874
NONHSAG005499.3rs7081524Gene expression of LOC387647 in CHB-JPT lymphoblastoid cell lines17873874
NONHSAG005499.3rs7916641Gene expression of LOC387647 in CHB-JPT lymphoblastoid cell lines17873874
NONHSAG005499.3rs10740803Gene expression of LOC387647 in CHB-JPT lymphoblastoid cell lines17873874
NONHSAG005499.3rs6481593Gene expression of LOC387647 in CHB-JPT lymphoblastoid cell lines17873874
NONHSAG005499.3rs1057952Gene expression of CECR7 in peripheral blood monocytes20502693
NONHSAG005499.3rs4749433Gene expression of LOC387647 in CHB lymphoblastoid cell lines17873874
NONHSAG005499.3rs4749434Gene expression of LOC387647 in CEU-CHB-JPT-YRI lymphoblastoid cell lines17873874
NONHSAG005499.3rs4747659Gene expression of LOC387647 in CEU-CHB-JPT-YRI lymphoblastoid cell lines17873874
NONHSAG005499.3rs4747659Gene expression of SVIL in blood21829388
NONHSAG005499.3rs1053636Gene expression of CECR7 in peripheral blood monocytes20502693
NONHSAG005499.3rs1053636Gene expression of LOC387647 in CEU-CHB-JPT lymphoblastoid cell lines17873874
NONHSAG005499.3rs11007606Gene expression of CECR7 in peripheral blood monocytes20502693
NONHSAG005499.3rs11007606Gene expression of TRPC4 in peripheral blood monocytes20502693
NONHSAG005499.3rs11007607Gene expression of CECR7 in peripheral blood monocytes20502693
NONHSAG005499.3rs11007607Gene expression of LOC387647 in YRI lymphoblastoid cell lines17873874
NONHSAG005499.3rs11007607Gene expression of SVIL in normal prepouch ileum23474282
NONHSAG005499.3rs7906814Gene expression of LOC387647 in CEU-CHB-JPT-YRI lymphoblastoid cell lines17873874
NONHSAG005499.3rs7906814Gene expression of SVIL in normal prepouch ileum23474282
NONHSAG005499.3rs2274494Gene expression of LOC387647 [probe 228786_at] in lymphoblastoid cell lines17873877
NONHSAG005499.3rs6481595Gene expression of LOC387647 in CEU-CHB-JPT-YRI lymphoblastoid cell lines17873874
NONHSAG005499.3rs7897170Gene expression of LOC387647 in CHB-JPT lymphoblastoid cell lines17873874
NONHSAG005499.3rs10826629Gene expression of LOC387647 in CEU-CHB-JPT-YRI lymphoblastoid cell lines17873874
NONHSAG005499.3rs2281946Gene expression of LOC387647 in CEU-CHB-JPT-YRI lymphoblastoid cell lines17873874
NONHSAG005499.3rs2281946Gene expression of LOC387647 [probe 228786_at] in lymphoblastoid cell lines17873877
NONHSAG005499.3rs2281946Gene expression of SVIL in blood21829388
NONHSAG005499.3rs7097877Gene expression of CECR7 in peripheral blood monocytes20502693
NONHSAG005499.3rs7097877Gene expression of LOC387647 (probeID ILMN_1679150) in breast tumors22522925
NONHSAG005499.3rs7097877Gene expression of Contig50004_RC in liver18462017
NONHSAG005499.3rs7097877Gene expression of LOC387647 in CHB-JPT lymphoblastoid cell lines17873874
NONHSAG005499.3rs7097877Gene expression of CMYA5 in liver18462017
NONHSAG005499.3rs7097877Gene expression of SVIL in liver18462017
NONHSAG005499.3rs10763719Gene expression of LOC387647 in CEU-CHB-JPT-YRI lymphoblastoid cell lines17873874
NONHSAG005499.3rs10740806Gene expression of LOC387647 in CEU-CHB-JPT-YRI lymphoblastoid cell lines17873874
NONHSAG005499.3rs10826631Gene expression of LOC387647 in CEU-CHB-JPT-YRI lymphoblastoid cell lines17873874
NONHSAG005499.3rs6481596Gene expression of LOC387647 in CHB lymphoblastoid cell lines17873874
NONHSAG005499.3rs7909727Gene expression of LOC387647 in YRI lymphoblastoid cell lines17873874
NONHSAG005499.3rs913034Gene expression of LOC387647 in CEU-CHB-JPT-YRI lymphoblastoid cell lines17873874
NONHSAG005499.3rs7096194Gene expression of CECR7 in peripheral blood monocytes20502693
NONHSAG005499.3rs7096194Gene expression of LOC387647 in YRI lymphoblastoid cell lines17873874
NONHSAG005499.3rs7096194Paclitaxel-induced cytotoxicity in lymphoblastoid cell lines23006423
NONHSAG005499.3rs7096453Gene expression of LOC387647 in CEU-CHB-JPT-YRI lymphoblastoid cell lines17873874
NONHSAG005499.3rs7096453Major depressive disorder (Citalopram treatment response)19846067
NONHSAG005499.3rs10740807Gene expression of CECR7 in peripheral blood monocytes20502693
NONHSAG005499.3rs3858231Gene expression of CECR7 in peripheral blood monocytes20502693
NONHSAG005499.3rs3858231Gene expression of LOC387647 in CHB-JPT lymphoblastoid cell lines17873874
NONHSAG005499.3rs3858231Gene expression of SVIL in liver18462017
NONHSAG005499.3rs3858231Major depressive disorder (Citalopram treatment response)19846067
NONHSAG005499.3rs1054767Differential exon level expression of SVIL [probe 3283013] in peripheral blood mononuclear cells19222302
NONHSAG005499.3rs1054767Gene expression of SVIL in blood21829388
NONHSAG005499.3rs1054767Differential exon level expression of SVIL [probe 3283013] in brain cortex19222302

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