An integrated knowledge database dedicated to ncRNAs, especially lncRNAs.
Detail infomation of NONHSAG005583.3

General info

NONCODE GENE IDNONHSAG005583.3
Chromosomechr10
Start Site33055916
End Site33116807
Strand-
Length1790
Assemblyhg38
ClassLinc;
Other Gene VersionsNONHSAG005583.2(old version)

Transcripts in Gene

NONCODE TRANSCRIPT ID
NONHSAT156867.1
NONHSAT228944.1
NONHSAT228945.1
NONHSAT228946.1
NONHSAT228947.1
NONHSAT228948.1
NONHSAT012672.2
NONHSAT012673.2

Expression Profile (Data Source:Human Body Map)

adiposeadrenalbrainbrain_Rbreastcolon
00000.02602030
foreskinheartheart_RHLF_1HLF_2kidney
00.002868460000.0474279
liverliver_RlunglymphNodeovaryplacenta_R
00001.29554e-110.0245215
prostateskeltalMuscletestestestes_RthyroidwhiteBloodCell
0.02110910.053583801.82609e-0600
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Exosome Expression Profile (Data Source: NCBI GEO)

A431_cellLine
(Squamous Cell Carcinoma Cell Line Exosomes)		BJ_cellLine
(Foreskin Fibroblast Cell Line Exosomes)		HepG2_cellLine
(Hepatocellular Carcinoma Cell Line Exosomes)		HUVEC_cellLine
(Human Umbilical Vein Endothelial Cell Line Exosomes)		invasive_NFPAs
(Invasive Non-functional Pituitary Adenomas Exosomes)
0000.1185490.788597
non-invasive_NFPAs
(Non-invasive Non-functional Pituitary Adenomas Exosomes)		MCF7_cellLine
(Human Breast Cancer Cell Line Exosomes)		MDA-MB-231_cellLine
(Human Breast Cancer Cell Line Exosomes)		tuberculosis_patients_serum
(Active Tuberculosis Patients Serum Exosomes)		normal_people_blood
(Normal People Blood Exosomes)
1.43591002.073370
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Expression Profile (Data Source: Single Cell)

Conservation Info

  • Chordata
    • Vertebrates
      • Manmals
        • Primates
        • Rodents
          • Mouse : N/A
          • Rat : N/A
        • Laurasiatheria
          • Pig : N/A
          • Cow : N/A
        • Opossum : N/A
        • Platypus : N/A
      • Birds
        • Chicken : N/A
    • Actinopteryqii
      • Zebrafish : N/A

Note: T = There are transcripts in this region.

Disease related

Disease:

NONCODE IDGene SymbolDisease nameSource DatabaseSource PMID
NONHSAG005583.3ITGB1breast cancerLnc2Cancer26601916

Mutations:

NONCODE IDSNP IDGWAS traitSource PMID
NONHSAG005583.3rs7078479Depression scale of the Revised NEO Personality Inventory20800221
NONHSAG005583.3rs7078479Depression (quantitative trait)20800221
NONHSAG005583.3rs17230579Irritable mania vs Elated mania23326512
NONHSAG005583.3rs17230579Bipolar disorder (mania)23326512
NONHSAG005583.3rs17230579Irritable mania vs control23326512
NONHSAG005583.3rs17230579Depression (quantitative trait)20800221
NONHSAG005583.3rs17230579Depression scale of the Revised NEO Personality Inventory20800221
NONHSAG005583.3rs11009203Depression scale of the Revised NEO Personality Inventory20800221
NONHSAG005583.3rs11009203Depression (quantitative trait)20800221
NONHSAG005583.3rs10827177Depression scale of the Revised NEO Personality Inventory20800221
NONHSAG005583.3rs10827178Depression scale of the Revised NEO Personality Inventory20800221
NONHSAG005583.3rs2666229Gene expression of [probe 540279 centered at chr10:33216718] in blood21829388
NONHSAG005583.3rs2666261Hepatitis B virus (HBV)-related hepatocellular carcinoma22807686
NONHSAG005583.3rs11009208Depression (quantitative trait)20800221
NONHSAG005583.3rs11009208Depression scale of the Revised NEO Personality Inventory20800221
NONHSAG005583.3rs12355459Depression scale of the Revised NEO Personality Inventory20800221
NONHSAG005583.3rs12355459Depression (quantitative trait)20800221
NONHSAG005583.3rs12359953Depression scale of the Revised NEO Personality Inventory20800221
NONHSAG005583.3rs12359953Depression (quantitative trait)20800221
NONHSAG005583.3rs10827179Depression scale of the Revised NEO Personality Inventory20800221
NONHSAG005583.3rs10827179Depression (quantitative trait)20800221
NONHSAG005583.3rs752251Autism with verbal ability20663923
NONHSAG005583.3rs752251Autism20663923
NONHSAG005583.3rs2666279PA aa C22:219043545
NONHSAG005583.3rs11009213Depression scale of the Revised NEO Personality Inventory20800221
NONHSAG005583.3rs11009213Depression (quantitative trait)20800221
NONHSAG005583.3rs11009216Depression scale of the Revised NEO Personality Inventory20800221
NONHSAG005583.3rs11009216Depression (quantitative trait)20800221
NONHSAG005583.3rs2666275PA aa C22:219043545
NONHSAG005583.3rs1923272Autism with verbal ability20663923
NONHSAG005583.3rs1923272Autism20663923
NONHSAG005583.3rs7088801Hypertension (early onset hypertension)22479346
NONHSAG005583.3rs10827183Depression (quantitative trait)20800221
NONHSAG005583.3rs10827183Depression scale of the Revised NEO Personality Inventory20800221
NONHSAG005583.3rs12571443Depression (quantitative trait)20800221
NONHSAG005583.3rs12571443Depression scale of the Revised NEO Personality Inventory20800221
NONHSAG005583.3rs10827185Monocyte counts0
NONHSAG005583.3rs10827186Depression (quantitative trait)20800221
NONHSAG005583.3rs10827186Depression scale of the Revised NEO Personality Inventory20800221
NONHSAG005583.3rs16933929Depression scale of the Revised NEO Personality Inventory20800221
NONHSAG005583.3rs16933929Depression (quantitative trait)20800221
NONHSAG005583.3rs11009222Depression (quantitative trait)20800221
NONHSAG005583.3rs11009222Depression scale of the Revised NEO Personality Inventory20800221
NONHSAG005583.3rs11009222Type 1 diabetes, combined control dataset17554300
NONHSAG005583.3rs11009222Multiple complex diseases17554300
NONHSAG005583.3rs17296373Depression (quantitative trait)20800221
NONHSAG005583.3rs17296373Depression scale of the Revised NEO Personality Inventory20800221
NONHSAG005583.3rs2755996Ulcerative colitis21297633
NONHSAG005583.3rs2750066Internal carotid artery thickness (average of near and far walls)23487405
NONHSAG005583.3rs17296387Multiple complex diseases17554300
NONHSAG005583.3rs17296387Type 1 diabetes, combined control dataset17554300
NONHSAG005583.3rs2666265Multiple complex diseases17554300
NONHSAG005583.3rs2666265Type 1 diabetes, combined control dataset17554300
NONHSAG005583.3rs2057253Gene expression of [probe 540279 centered at chr10:33216718] in blood21829388
NONHSAG005583.3rs11009228Type 1 diabetes, combined control dataset17554300
NONHSAG005583.3rs11009228Multiple complex diseases17554300
NONHSAG005583.3rs7070343Autism with verbal ability20663923
NONHSAG005583.3rs12219840Triglycerides20686565
NONHSAG005583.3rs11009229Triglycerides20686565
NONHSAG005583.3rs2755979Gene expression of ALOX15 in peripheral blood monocytes20502693
NONHSAG005583.3rs11009230Triglycerides20686565
NONHSAG005583.3rs11009231Multiple complex diseases17554300
NONHSAG005583.3rs11009231Type 1 diabetes, combined control dataset17554300
NONHSAG005583.3rs10827201Type 1 diabetes, combined control dataset17554300
NONHSAG005583.3rs10827201Multiple complex diseases17554300
NONHSAG005583.3rs7902627IGP1023382691
NONHSAG005583.3rs7902627IgG glycosylation23382691

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