An integrated knowledge database dedicated to ncRNAs, especially lncRNAs.
Detail infomation of NONHSAG005652.1

General info

NONCODE GENE IDNONHSAG005652.1
Chromosomechr10
Start Site38536850
End Site38622083
Strand+
Length422
Assemblyhg19
ClassLinc;
Other Gene VersionsNONHSAG005652.2

Transcripts in Gene

NONCODE TRANSCRIPT ID
NONHSAT012815.1

Expression Profile (Data Source:)

adiposeadrenalbrainbrain_Rbreastcolon
foreskinheartheart_RHLF_1HLF_2kidney
liverliver_RlunglymphNodeovaryplacenta_R
prostateskeltalMuscletestestestes_RthyroidwhiteBloodCell
NA

Exosome Expression Profile (Data Source: NCBI GEO)

NA

Expression Profile (Data Source: Single Cell)

Conservation Info

  • Chordata
    • Vertebrates
      • Manmals
        • Primates
          • Human
          • Chimp : N/A
          • Gorilla : N/A
          • Orangutan : N/A
          • Rhesus : N/A
        • Rodents
          • Mouse : N/A
          • Rat : N/A
        • Laurasiatheria
          • Pig : N/A
          • Cow : N/A
        • Opossum : N/A
        • Platypus : N/A
      • Birds
        • Chicken : N/A
    • Actinopteryqii
      • Zebrafish : N/A

Note: T = There are transcripts in this region.

Disease related

Disease:

NONCODE IDGene SymbolDisease nameSource DatabaseSource PMID
NONHSAG005652.2RP11-672F9.1hepatocellular carcinomaLnc2Cancer25556502

Mutations:

NONCODE IDSNP IDGWAS traitSource PMID
NONHSAG005652.2rs2800485Gene expression of LOC158160 in CEU-CHB-JPT-YRI lymphoblastoid cell lines17873874
NONHSAG005652.2rs2749647Suicide attempts in bipolar disorder (substance free)21423239
NONHSAG005652.2rs2983338Gene expression of LOC158160 in CEU-CHB-JPT-YRI lymphoblastoid cell lines17873874
NONHSAG005652.2rs2996580Gene expression of HSD17B7P2 [probe 224058_s_at] in lymphoblastoid cell lines17873877
NONHSAG005652.2rs2996580Gene expression of LOC158160 in CEU-CHB-JPT-YRI lymphoblastoid cell lines17873874
NONHSAG005652.2rs2996580Suicide attempts in bipolar disorder (substance free)21423239
NONHSAG005652.2rs2983854Gene expression of LOC399744 in normal prepouch ileum23474282
NONHSAG005652.2rs2983854Suicide attempts in bipolar disorder (substance free)21423239
NONHSAG005652.2rs2983855Gene expression of CUTA in peripheral blood monocytes20502693
NONHSAG005652.2rs2983855Gene expression of NDUFB11 in peripheral blood monocytes20502693
NONHSAG005652.2rs7918045Triglycerides20686565
NONHSAG005652.2rs2804669Gene expression of HSD17B7P2 in liver18462017
NONHSAG005652.2rs2804665Gene expression of LOC399744 in normal prepouch ileum23474282
NONHSAG005652.2rs1892143Gene expression of HSD17B7P2 [probe 224058_s_at] in lymphoblastoid cell lines17873877
NONHSAG005652.2rs1892143Gene expression of LOC158160 in CEU-CHB-JPT-YRI lymphoblastoid cell lines17873874
NONHSAG005652.2rs1892143Gene expression of LOC399744 in normal prepouch ileum23474282
NONHSAG005652.2rs1892143Gene expression of LOC387655 in CEU-CHB-JPT-YRI lymphoblastoid cell lines17873874
NONHSAG005652.2rs7080636Triglycerides20686565

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