An integrated knowledge database dedicated to ncRNAs, especially lncRNAs.
Detail infomation of NONHSAG005652.2

General info

NONCODE GENE IDNONHSAG005652.2
Chromosomechr10
Start Site38247921
End Site38333155
Strand+
Length425
Assemblyhg38
ClassLinc;
Other Gene VersionsNONHSAG005652.1(old version)

Transcripts in Gene

NONCODE TRANSCRIPT ID
NONHSAT012815.2

Expression Profile (Data Source:Human Body Map)

adiposeadrenalbrainbrain_Rbreastcolon
0.2437311.172960.09051940.5473550.1444940.171136
foreskinheartheart_RHLF_1HLF_2kidney
00.143315000.06777730
liverliver_RlunglymphNodeovaryplacenta_R
00000.08464530
prostateskeltalMuscletestestestes_RthyroidwhiteBloodCell
00000.3876120
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Exosome Expression Profile (Data Source: NCBI GEO)

A431_cellLine
(Squamous Cell Carcinoma Cell Line Exosomes)		BJ_cellLine
(Foreskin Fibroblast Cell Line Exosomes)		HepG2_cellLine
(Hepatocellular Carcinoma Cell Line Exosomes)		HUVEC_cellLine
(Human Umbilical Vein Endothelial Cell Line Exosomes)		invasive_NFPAs
(Invasive Non-functional Pituitary Adenomas Exosomes)
005.8991706.18756
non-invasive_NFPAs
(Non-invasive Non-functional Pituitary Adenomas Exosomes)		MCF7_cellLine
(Human Breast Cancer Cell Line Exosomes)		MDA-MB-231_cellLine
(Human Breast Cancer Cell Line Exosomes)		tuberculosis_patients_serum
(Active Tuberculosis Patients Serum Exosomes)		normal_people_blood
(Normal People Blood Exosomes)
4.838180019.70340
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Expression Profile (Data Source: Single Cell)

Conservation Info

Note: T = There are transcripts in this region.

Disease related

Disease:

NONCODE IDGene SymbolDisease nameSource DatabaseSource PMID
NONHSAG005652.2RP11-672F9.1hepatocellular carcinomaLnc2Cancer25556502

Mutations:

NONCODE IDSNP IDGWAS traitSource PMID
NONHSAG005652.2rs2800485Gene expression of LOC158160 in CEU-CHB-JPT-YRI lymphoblastoid cell lines17873874
NONHSAG005652.2rs2749647Suicide attempts in bipolar disorder (substance free)21423239
NONHSAG005652.2rs2983338Gene expression of LOC158160 in CEU-CHB-JPT-YRI lymphoblastoid cell lines17873874
NONHSAG005652.2rs2996580Gene expression of HSD17B7P2 [probe 224058_s_at] in lymphoblastoid cell lines17873877
NONHSAG005652.2rs2996580Gene expression of LOC158160 in CEU-CHB-JPT-YRI lymphoblastoid cell lines17873874
NONHSAG005652.2rs2996580Suicide attempts in bipolar disorder (substance free)21423239
NONHSAG005652.2rs2983854Gene expression of LOC399744 in normal prepouch ileum23474282
NONHSAG005652.2rs2983854Suicide attempts in bipolar disorder (substance free)21423239
NONHSAG005652.2rs2983855Gene expression of CUTA in peripheral blood monocytes20502693
NONHSAG005652.2rs2983855Gene expression of NDUFB11 in peripheral blood monocytes20502693
NONHSAG005652.2rs7918045Triglycerides20686565
NONHSAG005652.2rs2804669Gene expression of HSD17B7P2 in liver18462017
NONHSAG005652.2rs2804665Gene expression of LOC399744 in normal prepouch ileum23474282
NONHSAG005652.2rs1892143Gene expression of HSD17B7P2 [probe 224058_s_at] in lymphoblastoid cell lines17873877
NONHSAG005652.2rs1892143Gene expression of LOC158160 in CEU-CHB-JPT-YRI lymphoblastoid cell lines17873874
NONHSAG005652.2rs1892143Gene expression of LOC399744 in normal prepouch ileum23474282
NONHSAG005652.2rs1892143Gene expression of LOC387655 in CEU-CHB-JPT-YRI lymphoblastoid cell lines17873874
NONHSAG005652.2rs7080636Triglycerides20686565

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