Detail infomation of NONHSAG005920.2--NONCODE

Detail infomation of NONHSAG005920.2

General info

NONCODE GENE ID	NONHSAG005920.2
Chromosome	chr10
Start Site	52226988
End Site	52425415
Strand	-
Length	4080
Assembly	hg38
Class	Linc;
Other Gene Versions	NONHSAG005920.3

Transcripts in Gene

NONCODE TRANSCRIPT ID

NONHSAT157014.1

NONHSAT157015.1

NONHSAT157016.1

Expression Profile (Data Source:Human Body Map)

adipose	adrenal	brain	brain_R	breast	colon

foreskin	heart	heart_R	HLF_1	HLF_2	kidney

liver	liver_R	lung	lymphNode	ovary	placenta_R

prostate	skeltalMuscle	testes	testes_R	thyroid	whiteBloodCell

Exosome Expression Profile (Data Source: NCBI GEO)

Expression Profile (Data Source: Single Cell)

Conservation Info

Chordata
- Vertebrates
  - Manmals
    - Primates
      - Human
      - Chimp : N/A
      - Gorilla : N/A
      - Orangutan : N/A
      - Rhesus : N/A
    - Rodents
      - Mouse : N/A
      - Rat : N/A
    - Laurasiatheria
      - Pig : N/A
      - Cow : N/A
    - Opossum : N/A
    - Platypus : N/A
  - Birds
    - Chicken : N/A
- Actinopteryqii
  - Zebrafish : N/A

Note: T = There are transcripts in this region.

Disease related

Disease:

NONCODE ID	Gene Symbol	Disease name	Source Database	Source PMID
NONHSAG005920.3	PRKG1-AS1	rheumatoid arthritis	LncRNAWiki	0

Mutations:

NONCODE ID	SNP ID	GWAS trait	Source PMID
NONHSAG005920.3	rs2134760	Recurrent early onset major depressive disorder	20125088
NONHSAG005920.3	rs9416044	Multiple complex diseases	17554300
NONHSAG005920.3	rs9416044	Type 1 diabetes	17554300
NONHSAG005920.3	rs11001164	Gene expression of TBC1D9 in peripheral blood monocytes	20502693
NONHSAG005920.3	rs1194491	Parkinson's disease (PD)	21812969
NONHSAG005920.3	rs1194492	Recurrent early onset major depressive disorder	20125088
NONHSAG005920.3	rs1194495	Recurrent early onset major depressive disorder	20125088
NONHSAG005920.3	rs10508964	Type 1 diabetes, gender differentiated	17554300
NONHSAG005920.3	rs10508964	Multiple complex diseases	17554300
NONHSAG005920.3	rs10824246	Gene expression of CCNA2 in peripheral blood monocytes	20502693
NONHSAG005920.3	rs11001210	Gene expression of MEX3B in peripheral blood monocytes	20502693
NONHSAG005920.3	rs11001213	Gene expression of CCNA2 in peripheral blood monocytes	20502693
NONHSAG005920.3	rs1406476	Premature ovarian failure	19508998
NONHSAG005920.3	rs1729581	Suicide attempts in bipolar disorder (females)	21423239
NONHSAG005920.3	rs1729578	Suicide attempts in bipolar disorder (females)	21423239
NONHSAG005920.3	rs7070276	Gene expression of RNF168 in peripheral blood monocytes	20502693
NONHSAG005920.3	rs7070276	Gene expression of PERP in peripheral blood monocytes	20502693
NONHSAG005920.3	rs10824262	Suicide attempts in bipolar disorder (females)	21423239
NONHSAG005920.3	rs7909343	Gene expression of PERP in peripheral blood monocytes	20502693
NONHSAG005920.3	rs7909343	Gene expression of RNF168 in peripheral blood monocytes	20502693
NONHSAG005920.3	rs7909343	Gene expression of RHEBL1 in peripheral blood monocytes	20502693
NONHSAG005920.3	rs2339954	Suicide attempts in bipolar disorder (females)	21423239
NONHSAG005920.3	rs2339954	Systolic blood pressure (SBP)	21909115
NONHSAG005920.3	rs7909144	Systolic blood pressure (SBP)	21909115
NONHSAG005920.3	rs7909144	Suicide attempts in bipolar disorder (females)	21423239
NONHSAG005920.3	rs1194500	Gene expression of PERP in peripheral blood monocytes	20502693
NONHSAG005920.3	rs1875792	Systolic blood pressure (SBP)	21909115
NONHSAG005920.3	rs1875792	Suicide attempts in bipolar disorder (females)	21423239
NONHSAG005920.3	rs1875793	Gene expression of SCTR in peripheral blood monocytes	20502693
NONHSAG005920.3	rs1875794	Systolic blood pressure (SBP)	21909115
NONHSAG005920.3	rs11001339	Systolic blood pressure (SBP)	21909115
NONHSAG005920.3	rs12218397	Systolic blood pressure (SBP)	21909115
NONHSAG005920.3	rs11001343	Systolic blood pressure (SBP)	21909115
NONHSAG005920.3	rs7074246	Systolic blood pressure (SBP)	21909115
NONHSAG005920.3	rs2174260	Systolic blood pressure (SBP)	21909115
NONHSAG005920.3	rs4041235	Systolic blood pressure (SBP)	21909115
NONHSAG005920.3	rs7907681	Systolic blood pressure (SBP)	21909115
NONHSAG005920.3	rs10824297	Gene expression of SCTR in peripheral blood monocytes	20502693
NONHSAG005920.3	rs11001385	Asthma	20860503
NONHSAG005920.3	rs1406473	Gene expression of PERP in peripheral blood monocytes	20502693
NONHSAG005920.3	rs1406473	Gene expression of RAB11B in peripheral blood monocytes	20502693
NONHSAG005920.3	rs1406473	Insulinogenic index	17463246
NONHSAG005920.3	rs1919460	Systolic blood pressure (SBP)	21909115
NONHSAG005920.3	rs1919461	Systolic blood pressure (SBP)	21909115
NONHSAG005920.3	rs11001447	Systolic blood pressure (SBP)	21909115
NONHSAG005920.3	rs11001456	Systolic blood pressure (SBP)	21909115
NONHSAG005920.3	rs10128309	Gene expression of PERP in peripheral blood monocytes	20502693
NONHSAG005920.3	rs16928954	Microalbuminuria	21355061
NONHSAG005920.3	rs7916242	Suicide attempts in bipolar disorder (females)	21423239
NONHSAG005920.3	rs11001472	Systolic blood pressure (SBP)	21909115
NONHSAG005920.3	rs10762675	Systolic blood pressure (SBP)	21909115
NONHSAG005920.3	rs1881597	Allele-specific Expression Patterns in human glioblastoma cell line U87MG	22467206
NONHSAG005920.3	rs12255069	College completion	23722424
NONHSAG005920.3	rs13499	Allele-specific Expression Patterns in human glioblastoma cell line U87MG	22467206
NONHSAG005920.3	rs16929121	Triglycerides	19060906
NONHSAG005920.3	rs12773082	Obsessive-compulsive disorder (OCD)	22889921
NONHSAG005920.3	rs7100461	Methylation levels at chr13:76499258-76499308 [hg18 coord, probe cg09291628] in Cerebellum	20485568
NONHSAG005920.3	rs7100461	College completion	23722424
NONHSAG005920.3	rs2241529	Allele-specific Expression Patterns in human glioblastoma cell line U87MG	22467206
NONHSAG005920.3	rs1569198	College completion	23722424
NONHSAG005920.3	rs2288335	Autism	20663923
NONHSAG005920.3	rs2288335	College completion	23722424
NONHSAG005920.3	rs1991393	Autism	20663923
NONHSAG005920.3	rs1991393	College completion	23722424
NONHSAG005920.3	rs1991392	Autism	20663923
NONHSAG005920.3	rs1991392	College completion	23722424
NONHSAG005920.3	rs12780421	College completion	23722424
NONHSAG005920.3	rs11001609	College completion	23722424
NONHSAG005920.3	rs1896373	Tourette's syndrome	22889924
NONHSAG005920.3	rs1896373	Tourette syndrome	22889924
NONHSAG005920.3	rs1528874	College completion	23722424
NONHSAG005920.3	rs10824381	Bipolar disorder in alcoholics	21876473
NONHSAG005920.3	rs1441123	College completion	23722424
NONHSAG005920.3	rs10508971	Gene expression of ACTL8 probe[A_23_P160388],ABCB11 probe[A_23_P39703],BAAT probe[A_23_P71810],CACNG2 probe[A_23_P84000] in endometrial tumors	21226949
NONHSAG005920.3	rs10508971	College completion	23722424
NONHSAG005920.3	rs1528873	College completion	23722424
NONHSAG005920.3	rs12778940	College completion	23722424
NONHSAG005920.3	rs11815399	College completion	23722424
NONHSAG005920.3	rs11001702	Cutaneous melanoma (skin cancer)	21926416
NONHSAG005920.3	rs11001702	Autism	20663923
NONHSAG005920.3	rs11001721	College completion	23722424
NONHSAG005920.3	rs10824390	College completion	23722424
NONHSAG005920.3	rs7075951	College completion	23722424
NONHSAG005920.3	rs7904997	College completion	23722424
NONHSAG005920.3	rs11001729	College completion	23722424
NONHSAG005920.3	rs10762712	College completion	23722424
NONHSAG005920.3	rs10740457	College completion	23722424
NONHSAG005920.3	rs1441124	College completion	23722424
NONHSAG005920.3	rs1441124	Recurrent early onset major depressive disorder (males)	20125088
NONHSAG005920.3	rs1194747	Recurrent early onset major depressive disorder (males)	20125088
NONHSAG005920.3	rs16929715	College completion	23722424
NONHSAG005920.3	rs16929715	Insulinogenic index	17463246
NONHSAG005920.3	rs16929715	Type 2 diabetes	17463246
NONHSAG005920.3	rs146295628	Periodontitis (Mean PAL)	24024966
NONHSAG005920.3	rs1194683	B-cell chronic lymphocytic leukemia	18758461
NONHSAG005920.3	rs112125027	Periodontitis (Mean PAL)	24024966
NONHSAG005920.3	rs138374901	Periodontitis (Mean PAL)	24024966
NONHSAG005920.3	rs1441127	LDL cholesterol	20339536
NONHSAG005920.3	rs1149782	HDL cholesterol	21347282
NONHSAG005920.3	rs1149775	HDL cholesterol	21347282
NONHSAG005920.3	rs1194671	Type 2 diabetes	17463246
NONHSAG005920.3	rs1194671	APOA2 (apolipoprotein AII)	17463246
NONHSAG005920.3	rs1194670	APOA2 (apolipoprotein AII)	17463246
NONHSAG005920.3	rs1194670	Type 2 diabetes	17463246
NONHSAG005920.3	rs1194668	APOA2 (apolipoprotein AII)	17463246
NONHSAG005920.3	rs1194668	Type 2 diabetes	17463246
NONHSAG005920.3	rs1194666	HDL cholesterol	20686565
NONHSAG005920.3	rs1194659	Multiple sclerosis, age of onset	19010793
NONHSAG005920.3	rs1194659	APOA2 (apolipoprotein AII)	17463246
NONHSAG005920.3	rs1194659	Type 2 diabetes	17463246
NONHSAG005920.3	rs16913607	Lung function (forced vital capacity)	24023788
NONHSAG005920.3	rs1733706	Multiple sclerosis, age of onset	19010793
NONHSAG005920.3	rs1733706	Multiple sclerosis (age of onset)	19010793
NONHSAG005920.3	rs1733706	Amyotrophic lateral sclerosis (sporadic)	24529757
NONHSAG005920.3	rs7080407	Crohn's disease, combined control dataset, gender differentiated	17554300
NONHSAG005920.3	rs7080407	Multiple complex diseases	17554300
NONHSAG005920.3	rs10824464	Multiple complex diseases	17554300
NONHSAG005920.3	rs10824464	Crohn's disease, combined control dataset	17554300

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