Detail infomation of NONHSAG006474.2--NONCODE

An integrated knowledge database dedicated to ncRNAs, especially lncRNAs.

Detail infomation of NONHSAG006474.2

General info

NONCODE GENE ID	NONHSAG006474.2
Chromosome	chr10
Start Site	88932389
End Site	88940820
Strand	+
Length	3805
Assembly	hg38
Class	Linc;
Other Gene Versions	NONHSAG006474.1(old version)

Transcripts in Gene

NONCODE TRANSCRIPT ID

NONHSAT155838.1

NONHSAT155839.1

NONHSAT155840.1

NONHSAT015482.2

NONHSAT015483.2

NONHSAT015484.2

Expression Profile (Data Source:Human Body Map)

adipose	adrenal	brain	brain_R	breast	colon
0.239612	0.37091	0.160665	0.11175	0.301823	0.196523
foreskin	heart	heart_R	HLF_1	HLF_2	kidney
0.114176	0.265648	0.119969	0.044039	0.359309	0.380175
liver	liver_R	lung	lymphNode	ovary	placenta_R
0.61961	0.113782	0.151658	0.191569	0.307801	0.107857
prostate	skeltalMuscle	testes	testes_R	thyroid	whiteBloodCell
0.376969	0.264654	0.293459	0.127477	0.506038	0.439002

Expression profile of NONHSAG006474 in Human tissues

Loading...

Exosome Expression Profile (Data Source: NCBI GEO)

A431_cellLine (Squamous Cell Carcinoma Cell Line Exosomes)	BJ_cellLine (Foreskin Fibroblast Cell Line Exosomes)	HepG2_cellLine (Hepatocellular Carcinoma Cell Line Exosomes)	HUVEC_cellLine (Human Umbilical Vein Endothelial Cell Line Exosomes)	invasive_NFPAs (Invasive Non-functional Pituitary Adenomas Exosomes)
0	35.4286	5.86274	11.9627	9.23879
non-invasive_NFPAs (Non-invasive Non-functional Pituitary Adenomas Exosomes)	MCF7_cellLine (Human Breast Cancer Cell Line Exosomes)	MDA-MB-231_cellLine (Human Breast Cancer Cell Line Exosomes)	tuberculosis_patients_serum (Active Tuberculosis Patients Serum Exosomes)	normal_people_blood (Normal People Blood Exosomes)
7.22472	0	0	9.29918	4.26015

Loading...

Expression Profile (Data Source: Single Cell)

Conservation Info

Chordata
- Vertebrates
  - Manmals
    - Primates
      - Human
      - Chimp : N/A
      - Gorilla : N/A
      - Orangutan : N/A
      - Rhesus : N/A
    - Rodents
      - Mouse : N/A
      - Rat : N/A
    - Laurasiatheria
      - Pig : chr14( len:9325 )
      - Cow : chr26( len:8100 )^T
    - Opossum : N/A
    - Platypus : N/A
  - Birds
    - Chicken : N/A
- Actinopteryqii
  - Zebrafish : N/A

Note: T = There are transcripts in this region.

Disease related

Disease:

NONCODE ID	Gene Symbol	Disease name	Source Database	Source PMID
NONHSAG006474.2	ACTA2-AS1	lung adenocarcinoma	MNDR	24721325
NONHSAG006474.2	ACTA2-AS1	lung adenocarcinoma	LncRNADisease	24721325
NONHSAG006474.2	ACTA2-AS1	lung adenocarcinoma	LncRNAWiki	0

Mutations:

NONCODE ID	SNP ID	GWAS trait	Source PMID
NONHSAG006474.2	rs1372325	Heart Rate	0
NONHSAG006474.2	rs1372325	Alcohol behavior (alcohol dependence factor score)	21529783
NONHSAG006474.2	rs2119685	Gene expression of STAMBPL1 [probe ILMN_1387] in osteoblasts with treatment interaction	21283786
NONHSAG006474.2	rs2119685	Gene expression of RP11-399O19.3 in blood	21829388

NONCODE

Introduce of NONCODE

Browse NONCODE

Search a gene/transcript

Statistics

Blast

Genome

ID Conversion

Download

Bio-tools

ncFANs

CNCI

lnc-GFP

lncRNA Analysis pipeline