An integrated knowledge database dedicated to ncRNAs, especially lncRNAs.
Detail infomation of NONHSAG006889.1

General info

NONCODE GENE IDNONHSAG006889.1
Chromosomechr10
Start Site114447364
End Site114511234
Strand+
Length481
Assemblyhg19
ClassLinc;
Other Gene VersionsNONHSAG006889.2

Transcripts in Gene

NONCODE TRANSCRIPT ID
NONHSAT016407.1

Expression Profile (Data Source:)

adiposeadrenalbrainbrain_Rbreastcolon
foreskinheartheart_RHLF_1HLF_2kidney
liverliver_RlunglymphNodeovaryplacenta_R
prostateskeltalMuscletestestestes_RthyroidwhiteBloodCell
NA

Exosome Expression Profile (Data Source: NCBI GEO)

NA

Expression Profile (Data Source: Single Cell)

Conservation Info

  • Chordata
    • Vertebrates
      • Manmals
        • Primates
          • Human
          • Chimp : N/A
          • Gorilla : N/A
          • Orangutan : N/A
          • Rhesus : N/A
        • Rodents
          • Mouse : N/A
          • Rat : N/A
        • Laurasiatheria
          • Pig : N/A
          • Cow : N/A
        • Opossum : N/A
        • Platypus : N/A
      • Birds
        • Chicken : N/A
    • Actinopteryqii
      • Zebrafish : N/A

Note: T = There are transcripts in this region.

Disease related

Disease:

NONCODE IDGene SymbolDisease nameSource DatabaseSource PMID
NONHSAG006889.2TCF7gastric cardia adenocarcinomaLnc2Cancer24414129
NONHSAG006889.2TCF7hepatocellular carcinomaLnc2Cancer25842979
NONHSAG006889.2TCF7hepatocellular carcinomaLnc2Cancer26452542

Mutations:

NONCODE IDSNP IDGWAS traitSource PMID
NONHSAG006889.2rs6585170Lung function, predicted ratio of forced expiratory volume in 1 second (FEV1) to forced vital capacity (FVC) (FEV1/FVC)19300500
NONHSAG006889.2rs7073681Lung function, predicted ratio of forced expiratory volume in 1 second (FEV1) to forced vital capacity (FVC) (FEV1/FVC)19300500
NONHSAG006889.2rs7906591Lung function, predicted ratio of forced expiratory volume in 1 second (FEV1) to forced vital capacity (FVC) (FEV1/FVC)19300500
NONHSAG006889.2rs11196070Suicide attempts in bipolar disorder21041247
NONHSAG006889.2rs11196072Suicide attempts in bipolar disorder21041247
NONHSAG006889.2rs7896021LDL cholesterol change with statins20339536
NONHSAG006889.2rs7342028QRS interval21076409
NONHSAG006889.2rs7342028Ventricular conduction21076409
NONHSAG006889.2rs11196075LDL cholesterol change with statins20339536
NONHSAG006889.2rs10885378Body mass index24827717
NONHSAG006889.2rs7915752Diastolic blood pressure (DBP)19609347
NONHSAG006889.2rs1885281Hypothyroidism22493691
NONHSAG006889.2rs7086803Lung cancer in never-smoking women23143601
NONHSAG006889.2rs7086803Lung cancer23143601
NONHSAG006889.2rs7086803Lung cancer (adenocarcinoma) in never-smoking women23143601
NONHSAG006889.2rs7086803Lung cancer (squamous lung carcinoma) in never-smoking women23143601
NONHSAG006889.2rs7918405Diastolic blood pressure (DBP)19609347
NONHSAG006889.2rs11196088Gene expression of SLC25A43 in peripheral blood monocytes20502693

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