An integrated knowledge database dedicated to ncRNAs, especially lncRNAs.
Detail infomation of NONHSAG006889.2

General info

NONCODE GENE IDNONHSAG006889.2
Chromosomechr10
Start Site112687604
End Site112751476
Strand+
Length485
Assemblyhg38
ClassLinc;
Other Gene VersionsNONHSAG006889.1(old version)

Transcripts in Gene

NONCODE TRANSCRIPT ID
NONHSAT156125.1
NONHSAT016407.2

Expression Profile (Data Source:Human Body Map)

adiposeadrenalbrainbrain_Rbreastcolon
0.02162130.1382540.152252000.00321191
foreskinheartheart_RHLF_1HLF_2kidney
00.1748560000.0306681
liverliver_RlunglymphNodeovaryplacenta_R
000.022899200.03116880
prostateskeltalMuscletestestestes_RthyroidwhiteBloodCell
0.0115309000.24025800.0717879
Loading...

Exosome Expression Profile (Data Source: NCBI GEO)

A431_cellLine
(Squamous Cell Carcinoma Cell Line Exosomes)		BJ_cellLine
(Foreskin Fibroblast Cell Line Exosomes)		HepG2_cellLine
(Hepatocellular Carcinoma Cell Line Exosomes)		HUVEC_cellLine
(Human Umbilical Vein Endothelial Cell Line Exosomes)		invasive_NFPAs
(Invasive Non-functional Pituitary Adenomas Exosomes)
27.424910.09675.169379.363297.07678
non-invasive_NFPAs
(Non-invasive Non-functional Pituitary Adenomas Exosomes)		MCF7_cellLine
(Human Breast Cancer Cell Line Exosomes)		MDA-MB-231_cellLine
(Human Breast Cancer Cell Line Exosomes)		tuberculosis_patients_serum
(Active Tuberculosis Patients Serum Exosomes)		normal_people_blood
(Normal People Blood Exosomes)
2.641540015.31220
Loading...

Expression Profile (Data Source: Single Cell)

Conservation Info

  • Chordata
    • Vertebrates
    • Actinopteryqii
      • Zebrafish : N/A

Note: T = There are transcripts in this region.

Disease related

Disease:

NONCODE IDGene SymbolDisease nameSource DatabaseSource PMID
NONHSAG006889.2TCF7gastric cardia adenocarcinomaLnc2Cancer24414129
NONHSAG006889.2TCF7hepatocellular carcinomaLnc2Cancer25842979
NONHSAG006889.2TCF7hepatocellular carcinomaLnc2Cancer26452542

Mutations:

NONCODE IDSNP IDGWAS traitSource PMID
NONHSAG006889.2rs6585170Lung function, predicted ratio of forced expiratory volume in 1 second (FEV1) to forced vital capacity (FVC) (FEV1/FVC)19300500
NONHSAG006889.2rs7073681Lung function, predicted ratio of forced expiratory volume in 1 second (FEV1) to forced vital capacity (FVC) (FEV1/FVC)19300500
NONHSAG006889.2rs7906591Lung function, predicted ratio of forced expiratory volume in 1 second (FEV1) to forced vital capacity (FVC) (FEV1/FVC)19300500
NONHSAG006889.2rs11196070Suicide attempts in bipolar disorder21041247
NONHSAG006889.2rs11196072Suicide attempts in bipolar disorder21041247
NONHSAG006889.2rs7896021LDL cholesterol change with statins20339536
NONHSAG006889.2rs7342028QRS interval21076409
NONHSAG006889.2rs7342028Ventricular conduction21076409
NONHSAG006889.2rs11196075LDL cholesterol change with statins20339536
NONHSAG006889.2rs10885378Body mass index24827717
NONHSAG006889.2rs7915752Diastolic blood pressure (DBP)19609347
NONHSAG006889.2rs1885281Hypothyroidism22493691
NONHSAG006889.2rs7086803Lung cancer in never-smoking women23143601
NONHSAG006889.2rs7086803Lung cancer23143601
NONHSAG006889.2rs7086803Lung cancer (adenocarcinoma) in never-smoking women23143601
NONHSAG006889.2rs7086803Lung cancer (squamous lung carcinoma) in never-smoking women23143601
NONHSAG006889.2rs7918405Diastolic blood pressure (DBP)19609347
NONHSAG006889.2rs11196088Gene expression of SLC25A43 in peripheral blood monocytes20502693

  NONCODE

Introduce of NONCODE
Browse NONCODE
Search a gene/transcript
Statistics
Blast
Genome
ID Conversion
Download

  Bio-tools

ncFANs
CNCI
lnc-GFP
lncRNA Analysis pipeline