Detail infomation of NONHSAG007414.2--NONCODE

An integrated knowledge database dedicated to ncRNAs, especially lncRNAs.

Detail infomation of NONHSAG007414.2

General info

NONCODE GENE ID	NONHSAG007414.2
Chromosome	chr11
Start Site	2158719
End Site	2168069
Strand	+
Length	454
Assembly	hg38
Class	Linc;
Other Gene Versions	NONHSAG007414.1(old version)

Transcripts in Gene

NONCODE TRANSCRIPT ID

NONHSAT017490.2

Expression Profile (Data Source:Human Body Map)

adipose	adrenal	brain	brain_R	breast	colon
0	0	0	0	0	0
foreskin	heart	heart_R	HLF_1	HLF_2	kidney
0	0	0	0	0	0.0345955
liver	liver_R	lung	lymphNode	ovary	placenta_R
0.434082	0	0	0	0.0360931	0.93913
prostate	skeltalMuscle	testes	testes_R	thyroid	whiteBloodCell
0.0257401	0	0	0	0	0

Expression profile of NONHSAG007414 in Human tissues

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Exosome Expression Profile (Data Source: NCBI GEO)

A431_cellLine (Squamous Cell Carcinoma Cell Line Exosomes)	BJ_cellLine (Foreskin Fibroblast Cell Line Exosomes)	HepG2_cellLine (Hepatocellular Carcinoma Cell Line Exosomes)	HUVEC_cellLine (Human Umbilical Vein Endothelial Cell Line Exosomes)	invasive_NFPAs (Invasive Non-functional Pituitary Adenomas Exosomes)
0	0.318785	0	0	10.6692
non-invasive_NFPAs (Non-invasive Non-functional Pituitary Adenomas Exosomes)	MCF7_cellLine (Human Breast Cancer Cell Line Exosomes)	MDA-MB-231_cellLine (Human Breast Cancer Cell Line Exosomes)	tuberculosis_patients_serum (Active Tuberculosis Patients Serum Exosomes)	normal_people_blood (Normal People Blood Exosomes)
13.5874	0	0	11.2475	0

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Expression Profile (Data Source: Single Cell)

Conservation Info

Chordata
- Vertebrates
  - Manmals
    - Primates
      - Human
      - Chimp : chr11( len:9464 )
      - Gorilla : chr11( len:9018 )
      - Orangutan : chr11( len:9844 )
      - Rhesus : chr14( len:8868 )
    - Rodents
      - Mouse : N/A
      - Rat : N/A
    - Laurasiatheria
      - Pig : N/A
      - Cow : N/A
    - Opossum : N/A
    - Platypus : N/A
  - Birds
    - Chicken : N/A
- Actinopteryqii
  - Zebrafish : N/A

Note: T = There are transcripts in this region.

Disease related

Disease:

NONCODE ID	Gene Symbol	Disease name	Source Database	Source PMID
NONHSAG007414.2	IGF2-AS	nephroblastoma	MNDR	12702581
NONHSAG007414.2	IGF2-AS	nephroblastoma	MNDR	10731720
NONHSAG007414.2	IGF2-AS	astrocytoma	MNDR	25561975
NONHSAG007414.2	IGF2-AS	liver cancer	Lnc2Cancer	12702581
NONHSAG007414.2	IGF2-AS	hepatocellular carcinoma	MNDR	12603530
NONHSAG007414.2	IGF2-AS	hepatocelluar carcinoma	LncRNADisease	12603530
NONHSAG007414.2	IGF2-AS	hepatocelluar carcinoma,prostate cancer, type 1 diabetes, Wilms' tumor	LncRNAWiki	0
NONHSAG007414.2	IGF2-AS	hepatocellular carcinoma	Lnc2Cancer	12603530
NONHSAG007414.2	IGF2-AS	prostat	LncRNADisease	19767753
NONHSAG007414.2	IGF2-AS	type 1 diabetes	LncRNADisease	17554260
NONHSAG007414.2	IGF2-AS	Wilms' tumor	LncRNADisease	12702581
NONHSAG007414.2	IGF2-AS	Wilms' tumor	LncRNADisease	10731720
NONHSAG007414.2	IGF2-AS	Wilms tumor	Lnc2Cancer	12702581
NONHSAG007414.2	IGF2-AS	Wilms tumor	Lnc2Cancer	10731720

Mutations:

NONCODE ID	SNP ID	GWAS trait	Source PMID
NONHSAG007414.2	rs3842748	Methylation levels at chr11:2139220-2139270 [hg18 coord, probe cg03366382] in Temporal cortex	20485568
NONHSAG007414.2	rs3842748	Methylation levels at chr11:2139220-2139270 [hg18 coord, probe cg03366382] in Frontal cortex	20485568
NONHSAG007414.2	rs3842748	Methylation levels at chr11:2139220-2139270 [hg18 coord, probe cg03366382] in Cerebellum	20485568
NONHSAG007414.2	rs3842748	Recurrent early onset major depressive disorder (males)	20125088
NONHSAG007414.2	rs3842748	Systolic blood pressure (SBP)	21909115
NONHSAG007414.2	rs689	Type 1 diabetes autoantibodies	21829393
NONHSAG007414.2	rs689	Type 1 diabetes	21829393
NONHSAG007414.2	rs2070762	Coronary artery disease (CAD)	21971053
NONHSAG007414.2	rs2070762	Height	20881960

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