Detail infomation of NONHSAG008670.3--NONCODE

Detail infomation of NONHSAG008670.3

General info

NONCODE GENE ID	NONHSAG008670.3
Chromosome	chr11
Start Site	65416581
End Site	65450093
Strand	+
Length	31810
Assembly	hg38
Class	Linc;
Other Gene Versions	NONHSAG008670.1(old version)

Transcripts in Gene

NONCODE TRANSCRIPT ID

Expression Profile (Data Source:Human Body Map)

adipose	adrenal	brain	brain_R	breast	colon
0.829445	0.858001	0.369029	0.330882	0.699809	0.359973
foreskin	heart	heart_R	HLF_1	HLF_2	kidney
0.654427	0.339332	0.141148	0.117086	0.446008	0.417194
liver	liver_R	lung	lymphNode	ovary	placenta_R
0.307683	0.0194836	1.14829	0.607289	0.987366	0.443696
prostate	skeltalMuscle	testes	testes_R	thyroid	whiteBloodCell
0.855383	1.49729	0.643542	0.882923	0.752818	0.391606

Expression profile of NONHSAG008670 in Human tissues

Exosome Expression Profile (Data Source: NCBI GEO)

A431_cellLine (Squamous Cell Carcinoma Cell Line Exosomes)	BJ_cellLine (Foreskin Fibroblast Cell Line Exosomes)	HepG2_cellLine (Hepatocellular Carcinoma Cell Line Exosomes)	HUVEC_cellLine (Human Umbilical Vein Endothelial Cell Line Exosomes)	invasive_NFPAs (Invasive Non-functional Pituitary Adenomas Exosomes)
15.5262	49.7753	6.00432	81.9685	4.94957
non-invasive_NFPAs (Non-invasive Non-functional Pituitary Adenomas Exosomes)	MCF7_cellLine (Human Breast Cancer Cell Line Exosomes)	MDA-MB-231_cellLine (Human Breast Cancer Cell Line Exosomes)	tuberculosis_patients_serum (Active Tuberculosis Patients Serum Exosomes)	normal_people_blood (Normal People Blood Exosomes)
4.49899	0	0	1.99926	2.39505

Expression Profile (Data Source: Single Cell)

Conservation Info

Chordata
- Vertebrates
  - Manmals
    - Primates
      - Human
      - Chimp : chr11( len:36822 )^T
      - Gorilla : N/A
      - Orangutan : N/A
      - Rhesus : N/A
    - Rodents
      - Mouse : N/A
      - Rat : N/A
    - Laurasiatheria
      - Pig : N/A
      - Cow : N/A
    - Opossum : N/A
    - Platypus : N/A
  - Birds
    - Chicken : N/A
- Actinopteryqii
  - Zebrafish : N/A

Note: T = There are transcripts in this region.

Disease related

Disease:

NONCODE ID	Gene Symbol	Disease name	Source Database	Source PMID
NONHSAG008670.3	NEAT1	acute promyelocytic leukemia	Lnc2Cancer	25245097
NONHSAG008670.3	NEAT1	breast cancer	Lnc2Cancer	27147820
NONHSAG008670.3	NEAT1	breast cancer	Lnc2Cancer	25417700
NONHSAG008670.3	NEAT1	Burkitts lymphoma	Lnc2Cancer	25971364
NONHSAG008670.3	NEAT1	chronic lymphocytic leukemia	Lnc2Cancer	25971364
NONHSAG008670.3	NEAT1	colorectal cancer	Lnc2Cancer	26314847
NONHSAG008670.3	NEAT1	Seizures	Lnc2Cancer	22960213
NONHSAG008670.3	NEAT1	oral squamous cell carcinoma	Lnc2Cancer	23292713
NONHSAG008670.3	NEAT1	prostate cancer	Lnc2Cancer	23728290
NONHSAG008670.3	NEAT1	prostate cancer	Lnc2Cancer	25415230
NONHSAG008670.3	NEAT1	breast cancer	Lnc2Cancer	21532345
NONHSAG008670.3	NEAT1	relapsing-remitting multiple sclerosis	Lnc2Cancer	27034068
NONHSAG008670.3	NEAT1	ovarian cancer	Lnc2Cancer	27075229
NONHSAG008670.3	NEAT1	ovarian cancer	Lnc2Cancer	21532345
NONHSAG008670.3	NEAT1	laryngeal squamous cell carcinoma	Lnc2Cancer	26822763
NONHSAG008670.3	NEAT1	astrocytoma	Lnc2Cancer	25561975
NONHSAG008670.3	NEAT1	malignant glioma	Lnc2Cancer	26242266
NONHSAG008670.3	NEAT1	malignant glioma	Lnc2Cancer	26582084
NONHSAG008670.3	NEAT1	esophagus squamous cell carcinoma	Lnc2Cancer	26609486
NONHSAG008670.3	NEAT1	non-small cell lung carcinoma	Lnc2Cancer	27270317
NONHSAG008670.3	NEAT1	non-small cell lung carcinoma	Lnc2Cancer	27351135
NONHSAG008670.3	NEAT1	non-small cell lung carcinoma	Lnc2Cancer	25854373
NONHSAG008670.3	NEAT1	papillary thyroid carcinoma	Lnc2Cancer	25997963
NONHSAG008670.3	NEAT1	hepatocellular carcinoma	Lnc2Cancer	26191242
NONHSAG008670.3	NEAT1	Burkitt lymphoma	Lnc2Cancer	25971364
NONHSAG008670.3	NEAT1	nasopharynx carcinoma	Lnc2Cancer	27020592
NONHSAG008670.3	NEAT1	esophageal squamous cell carcinoma	Lnc2Cancer	26609486
NONHSAG008670.3	NEAT1	glioma	Lnc2Cancer	26582084
NONHSAG008670.3	NEAT1	infertility	LncRNAWiki	0
NONHSAG008670.3	NEAT1	nasopharyngeal carcinoma	Lnc2Cancer	27020592
NONHSAG008670.3	NEAT1	non-small cell lung cancer	Lnc2Cancer	27270317
NONHSAG008670.3	NEAT1	non-small cell lung cancer	Lnc2Cancer	27351135
NONHSAG008670.3	NEAT1	non-small cell lung cancer	Lnc2Cancer	25854373

Mutations:

NONCODE ID	SNP ID	GWAS trait	Source PMID
NONHSAG008670.3	rs2904976	Response to mTOR inhibitor (rapamycin)	24009623
NONHSAG008670.3	rs111685098	Myopia	23468642
NONHSAG008670.3	rs512715	Gene expression of AK027191 in liver	18462017
NONHSAG008670.3	rs512715	Gene expression of NCRNA00084 [probe 224566_at] in lymphoblastoid cell lines	17873877
NONHSAG008670.3	rs512715	Response to mTOR inhibitor (rapamycin)	24009623
NONHSAG008670.3	rs138453469	Myopia	23468642
NONHSAG008670.3	rs674485	Gene expression of MAP3K11///SIPA1 in blood	21829388
NONHSAG008670.3	rs674485	Gene expression of SCYL1 in blood	21829388
NONHSAG008670.3	rs674485	Gene expression of EHBP1L1 in blood	21829388
NONHSAG008670.3	rs674485	Gene expression of CAPN1 in blood	21829388
NONHSAG008670.3	rs674485	Gene expression of SCYL1///LTBP3 in blood	21829388
NONHSAG008670.3	rs673753	Gene expression of POLA2 in blood	21829388
NONHSAG008670.3	rs673753	Gene expression of SLC25A45 in blood	21829388
NONHSAG008670.3	rs673753	Gene expression of SIPA1 [probe ILMN_17494] in osteoblasts treated with dexamethasone	21283786
NONHSAG008670.3	rs1144925	Gene expression of INPP4B in peripheral blood monocytes	20502693
NONHSAG008670.3	rs1144925	Total cholesterol	20339536
NONHSAG008670.3	rs3741384	Myopia	23468642
NONHSAG008670.3	rs3741384	Breast cancer	19219042
NONHSAG008670.3	rs112217205	Myopia	23468642

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