Detail infomation of NONHSAG008790.3--NONCODE

Detail infomation of NONHSAG008790.3

General info

NONCODE GENE ID	NONHSAG008790.3
Chromosome	chr11
Start Site	67317638
End Site	67391893
Strand	+
Length	1790
Assembly	hg38
Class	Linc;
Other Gene Versions	NONHSAG008790.1(old version)

Transcripts in Gene

NONCODE TRANSCRIPT ID

Expression Profile (Data Source:Human Body Map)

adipose	adrenal	brain	brain_R	breast	colon
0.0292466	0.0405078	0	0	0	2.56396e-09
foreskin	heart	heart_R	HLF_1	HLF_2	kidney
0	0.0429343	0.0336201	0.0668806	0.199289	0.0165622
liver	liver_R	lung	lymphNode	ovary	placenta_R
0	0	0	0.108833	0.0409681	0
prostate	skeltalMuscle	testes	testes_R	thyroid	whiteBloodCell
0.144598	0	0.0204877	0.0951289	0.0114982	0

Expression profile of NONHSAG008790 in Human tissues

Exosome Expression Profile (Data Source: NCBI GEO)

A431_cellLine (Squamous Cell Carcinoma Cell Line Exosomes)	BJ_cellLine (Foreskin Fibroblast Cell Line Exosomes)	HepG2_cellLine (Hepatocellular Carcinoma Cell Line Exosomes)	HUVEC_cellLine (Human Umbilical Vein Endothelial Cell Line Exosomes)	invasive_NFPAs (Invasive Non-functional Pituitary Adenomas Exosomes)
0	4.84905	1.81974	4.74793	6.77313
non-invasive_NFPAs (Non-invasive Non-functional Pituitary Adenomas Exosomes)	MCF7_cellLine (Human Breast Cancer Cell Line Exosomes)	MDA-MB-231_cellLine (Human Breast Cancer Cell Line Exosomes)	tuberculosis_patients_serum (Active Tuberculosis Patients Serum Exosomes)	normal_people_blood (Normal People Blood Exosomes)
15.2162	0	0	5.19076	0

Expression Profile (Data Source: Single Cell)

Conservation Info

Chordata
- Vertebrates
  - Manmals
    - Primates
      - Human
      - Chimp : chr11( len:73905 )^T
      - Gorilla : N/A
      - Orangutan : chr11( len:76340 )^T
      - Rhesus : N/A
    - Rodents
      - Mouse : N/A
      - Rat : N/A
    - Laurasiatheria
      - Pig : N/A
      - Cow : N/A
    - Opossum : N/A
    - Platypus : N/A
  - Birds
    - Chicken : N/A
- Actinopteryqii
  - Zebrafish : N/A

Note: T = There are transcripts in this region.

Disease related

Disease:

NONCODE ID	Gene Symbol	Disease name	Source Database	Source PMID
NONHSAG008790.3	7SK	AIDS,cardiac hypertrophy,gastric cancer	LncRNAWiki	0
NONHSAG008790.3	7SK	AIDS	LncRNADisease	20471949
NONHSAG008790.3	7SK	AIDS	LncRNADisease	21098020
NONHSAG008790.3	7SK	AIDS	LncRNADisease	20976203
NONHSAG008790.3	7SK	AIDS	LncRNADisease	21087998
NONHSAG008790.3	7SK	AIDS	LncRNADisease	22377309
NONHSAG008790.3	7SK	cancer	LncRNADisease	22377309
NONHSAG008790.3	7SK	cardiac hypertrophy	LncRNADisease	22377309
NONHSAG008790.3	7SK	gastric cancer	LncRNADisease	22488152
NONHSAG008790.3	RN7SK	human immunodeficiency virus infectious disease	LncRNADisease	21087998

Mutations:

NONCODE ID	SNP ID	GWAS trait	Source PMID
NONHSAG008790.3	rs2256154	Gene expression of RPS6KB2 in peripheral blood monocytes	20502693
NONHSAG008790.3	rs2256154	Gene expression of PTPRCAP///CORO1B in blood	21829388
NONHSAG008790.3	rs2256154	Gene expression of SSH3 in blood	21829388
NONHSAG008790.3	rs2256154	Mean corpuscular volume (MCV)	23222517
NONHSAG008790.3	rs2256154	Gene expression of SSH3 in peripheral blood monocytes	20502693
NONHSAG008790.3	rs2256154	Gene expression of SIRPA in peripheral blood monocytes	20502693
NONHSAG008790.3	rs2256154	Gene expression of RPS6KB2 in blood	21829388
NONHSAG008790.3	rs2256154	Lymphocyte counts	22286170
NONHSAG008790.3	rs1638566	Gene expression of SSH3 in blood	21829388
NONHSAG008790.3	rs1638566	Gene expression of RPS6KB2 in CHB-JPT lymphoblastoid cell lines	17873874
NONHSAG008790.3	rs1638566	Gene expression of PTPRCAP///CORO1B in blood	21829388
NONHSAG008790.3	rs1638566	Gene expression of RPS6KB2///PTPRCAP in blood	21829388
NONHSAG008790.3	rs1638567	Gene expression of SSH3 in blood	21829388
NONHSAG008790.3	rs1638567	Gene expression of TBC1D10C in peripheral blood monocytes	20502693
NONHSAG008790.3	rs1638567	Gene expression of SSH3 in peripheral blood monocytes	20502693
NONHSAG008790.3	rs1638567	Gene expression of RPS6KB2 in CHB-JPT lymphoblastoid cell lines	17873874
NONHSAG008790.3	rs1638567	Gene expression of FAM90A1 in peripheral blood monocytes	20502693
NONHSAG008790.3	rs1638567	Gene expression of PTPRCAP///CORO1B in blood	21829388
NONHSAG008790.3	rs1790740	Gene expression of SSH3 in blood	21829388
NONHSAG008790.3	rs1790740	Gene expression of TBC1D10C in peripheral blood monocytes	20502693
NONHSAG008790.3	rs1790740	Gene expression of SSH3 in peripheral blood monocytes	20502693
NONHSAG008790.3	rs1790740	Gene expression of RPS6KB2 in CHB-JPT lymphoblastoid cell lines	17873874
NONHSAG008790.3	rs1790740	Gene expression of PTPRCAP///CORO1B in blood	21829388
NONHSAG008790.3	rs1790740	Gene expression of RPS6KB2///PTPRCAP in blood	21829388
NONHSAG008790.3	rs3781941	Gene expression of SSH3 in blood	21829388
NONHSAG008790.3	rs3781941	Gene expression of RPS6KB2 in CHB-JPT lymphoblastoid cell lines	17873874
NONHSAG008790.3	rs3781941	Gene expression of PTPRCAP///CORO1B in blood	21829388
NONHSAG008790.3	rs3758943	Gene expression of RPS6KB2 in CHB-JPT lymphoblastoid cell lines	17873874

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