Detail infomation of NONHSAG009728.2--NONCODE

An integrated knowledge database dedicated to ncRNAs, especially lncRNAs.

Detail infomation of NONHSAG009728.2

General info

NONCODE GENE ID	NONHSAG009728.2
Chromosome	chr11
Start Site	117289497
End Site	117293571
Strand	+
Length	3549
Assembly	hg38
Class	Linc;
Other Gene Versions	NONHSAG009728.1(old version)

Transcripts in Gene

NONCODE TRANSCRIPT ID

NONHSAT159734.1

NONHSAT159735.1

NONHSAT159736.1

NONHSAT024403.2

Expression Profile (Data Source:Human Body Map)

adipose	adrenal	brain	brain_R	breast	colon
0	0.0117594	0.0077887	0.0842129	0.00967531	0
foreskin	heart	heart_R	HLF_1	HLF_2	kidney
0	0	0	0	0	0
liver	liver_R	lung	lymphNode	ovary	placenta_R
0	0	0	0.0391611	0.0107078	0
prostate	skeltalMuscle	testes	testes_R	thyroid	whiteBloodCell
0	0	0.0785336	0.0685581	0.000194093	0

Expression profile of NONHSAG009728 in Human tissues

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Exosome Expression Profile (Data Source: NCBI GEO)

A431_cellLine (Squamous Cell Carcinoma Cell Line Exosomes)	BJ_cellLine (Foreskin Fibroblast Cell Line Exosomes)	HepG2_cellLine (Hepatocellular Carcinoma Cell Line Exosomes)	HUVEC_cellLine (Human Umbilical Vein Endothelial Cell Line Exosomes)	invasive_NFPAs (Invasive Non-functional Pituitary Adenomas Exosomes)
0	36.5202	7.41483	23.7886	8.20683
non-invasive_NFPAs (Non-invasive Non-functional Pituitary Adenomas Exosomes)	MCF7_cellLine (Human Breast Cancer Cell Line Exosomes)	MDA-MB-231_cellLine (Human Breast Cancer Cell Line Exosomes)	tuberculosis_patients_serum (Active Tuberculosis Patients Serum Exosomes)	normal_people_blood (Normal People Blood Exosomes)
8.04231	0	0	6.1473	4.5611

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Expression Profile (Data Source: Single Cell)

Conservation Info

Chordata
- Vertebrates
  - Manmals
    - Primates
      - Human
      - Chimp : chr11( len:4071 )
      - Gorilla : N/A
      - Orangutan : chr11( len:4064 )
      - Rhesus : chr14( len:4081 )
    - Rodents
      - Mouse : N/A
      - Rat : N/A
    - Laurasiatheria
      - Pig : N/A
      - Cow : N/A
    - Opossum : N/A
    - Platypus : N/A
  - Birds
    - Chicken : N/A
- Actinopteryqii
  - Zebrafish : N/A

Note: T = There are transcripts in this region.

Disease related

Disease:

NONCODE ID	Gene Symbol	Disease name	Source Database	Source PMID
NONHSAG009728.2	BACE1AS	colon cancer	Lnc2Cancer	25078450

Mutations:

NONCODE ID	SNP ID	GWAS trait	Source PMID
NONHSAG009728.2	rs490460	Parkinson's disease	22451204
NONHSAG009728.2	rs490460	HDL cholesterol	20686565
NONHSAG009728.2	rs490460	Total cholesterol	20686565

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