Detail infomation of NONHSAG010486.2--NONCODE

An integrated knowledge database dedicated to ncRNAs, especially lncRNAs.

Detail infomation of NONHSAG010486.2

General info

NONCODE GENE ID	NONHSAG010486.2
Chromosome	chr12
Start Site	10553363
End Site	10559696
Strand	+
Length	2847
Assembly	hg38
Class	Linc;
Other Gene Versions	NONHSAG010486.1(old version)

Transcripts in Gene

NONCODE TRANSCRIPT ID

NONHSAT161849.1

NONHSAT026886.2

NONHSAT026887.2

Expression Profile (Data Source:Human Body Map)

adipose	adrenal	brain	brain_R	breast	colon
0.0282856	0.577291	0.362389	0.137041	0.0584403	0.0409453
foreskin	heart	heart_R	HLF_1	HLF_2	kidney
0	0.0556058	0	0	0	0.138715
liver	liver_R	lung	lymphNode	ovary	placenta_R
0.116344	0.0193593	0.548864	1.85808	0.15591	0.147008
prostate	skeltalMuscle	testes	testes_R	thyroid	whiteBloodCell
0.0583853	0	0.0404566	0.0720764	0.141217	6.3633

Expression profile of NONHSAG010486 in Human tissues

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Exosome Expression Profile (Data Source: NCBI GEO)

A431_cellLine (Squamous Cell Carcinoma Cell Line Exosomes)	BJ_cellLine (Foreskin Fibroblast Cell Line Exosomes)	HepG2_cellLine (Hepatocellular Carcinoma Cell Line Exosomes)	HUVEC_cellLine (Human Umbilical Vein Endothelial Cell Line Exosomes)	invasive_NFPAs (Invasive Non-functional Pituitary Adenomas Exosomes)
0	0	0	0.115532	3.40477
non-invasive_NFPAs (Non-invasive Non-functional Pituitary Adenomas Exosomes)	MCF7_cellLine (Human Breast Cancer Cell Line Exosomes)	MDA-MB-231_cellLine (Human Breast Cancer Cell Line Exosomes)	tuberculosis_patients_serum (Active Tuberculosis Patients Serum Exosomes)	normal_people_blood (Normal People Blood Exosomes)
1.53337	0	0	7.01325	9.61822

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Expression Profile (Data Source: Single Cell)

Conservation Info

Chordata
- Vertebrates
  - Manmals
    - Primates
      - Human
      - Chimp : chr12( len:6344 )
      - Gorilla : chr12( len:6347 )
      - Orangutan : chr12( len:6338 )^T
      - Rhesus : N/A
    - Rodents
      - Mouse : N/A
      - Rat : N/A
    - Laurasiatheria
      - Pig : N/A
      - Cow : N/A
    - Opossum : N/A
    - Platypus : N/A
  - Birds
    - Chicken : N/A
- Actinopteryqii
  - Zebrafish : N/A

Note: T = There are transcripts in this region.

Disease related

Disease:

NONCODE ID	Gene Symbol	Disease name	Source Database	Source PMID
NONHSAG010486.2	ENST00000544591	colorectal cancer	Lnc2Cancer	25921151

Mutations:

NONCODE ID	SNP ID	GWAS trait	Source PMID
NONHSAG010486.2	rs4237928	Type 1 diabetes, end stage renal disease vs. normal albuminuria	23028342
NONHSAG010486.2	rs4237928	Gene expression of KLRA1 in blood	21829388
NONHSAG010486.2	rs4763548	Type 1 diabetes, end stage renal disease vs. normal albuminuria	23028342

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