Detail infomation of NONHSAG011392.2--NONCODE

An integrated knowledge database dedicated to ncRNAs, especially lncRNAs.

Detail infomation of NONHSAG011392.2

General info

NONCODE GENE ID	NONHSAG011392.2
Chromosome	chr12
Start Site	56670451
End Site	56671300
Strand	-
Length	849
Assembly	hg38
Class	Linc;
Other Gene Versions	NONHSAG011392.1(old version)

Transcripts in Gene

NONCODE TRANSCRIPT ID

NONHSAT163615.1

NONHSAT163616.1

NONHSAT028840.2

Expression Profile (Data Source:Human Body Map)

adipose	adrenal	brain	brain_R	breast	colon
0.110788	0.597897	0.00127677	0.249817	0.366957	0
foreskin	heart	heart_R	HLF_1	HLF_2	kidney
0.156563	0.341024	0.400216	0.248826	0.163515	0.0393127
liver	liver_R	lung	lymphNode	ovary	placenta_R
0.0515545	0.0784485	0.062878	0.164497	0.144219	0.443759
prostate	skeltalMuscle	testes	testes_R	thyroid	whiteBloodCell
0.0103062	0	0.0117503	0.514839	0.0961833	0

Expression profile of NONHSAG011392 in Human tissues

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Exosome Expression Profile (Data Source: NCBI GEO)

A431_cellLine (Squamous Cell Carcinoma Cell Line Exosomes)	BJ_cellLine (Foreskin Fibroblast Cell Line Exosomes)	HepG2_cellLine (Hepatocellular Carcinoma Cell Line Exosomes)	HUVEC_cellLine (Human Umbilical Vein Endothelial Cell Line Exosomes)	invasive_NFPAs (Invasive Non-functional Pituitary Adenomas Exosomes)
0	18.4374	2.95306	18.796	7.62287
non-invasive_NFPAs (Non-invasive Non-functional Pituitary Adenomas Exosomes)	MCF7_cellLine (Human Breast Cancer Cell Line Exosomes)	MDA-MB-231_cellLine (Human Breast Cancer Cell Line Exosomes)	tuberculosis_patients_serum (Active Tuberculosis Patients Serum Exosomes)	normal_people_blood (Normal People Blood Exosomes)
4.84388	0	0	9.3097	0

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Expression Profile (Data Source: Single Cell)

Conservation Info

Chordata
- Vertebrates
  - Manmals
    - Primates
      - Human
      - Chimp : chr12( len:854 )
      - Gorilla : chr12( len:854 )
      - Orangutan : chr12( len:857 )
      - Rhesus : chr11( len:863 )
    - Rodents
      - Mouse : N/A
      - Rat : N/A
    - Laurasiatheria
      - Pig : N/A
      - Cow : N/A
    - Opossum : N/A
    - Platypus : N/A
  - Birds
    - Chicken : N/A
- Actinopteryqii
  - Zebrafish : N/A

Note: T = There are transcripts in this region.

Disease related

Disease:

NONCODE ID	Gene Symbol	Disease name	Source Database	Source PMID
NONHSAG011392.2	7SL	AIDS,dermatomyositis	LncRNAWiki	0
NONHSAG011392.2	7SL	AIDS	LncRNADisease	20926562
NONHSAG011392.2	7SL	AIDS	LncRNADisease	16489186
NONHSAG011392.2	7SL	dermatomyositis	LncRNADisease	16142868
NONHSAG011392.2	7SL	Leishmania	LncRNADisease	15955815
NONHSAG011392.2	7SL	Leishmania	LncRNADisease	20392923
NONHSAG011392.2	7SL	Leishmania	LncRNADisease	20856851
NONHSAG011392.2	7SL	Leishmania	LncRNADisease	20561310
NONHSAG011392.2	7SL	polymyositis	LncRNADisease	16142868

Mutations:

NONCODE ID	SNP ID	GWAS trait	Source PMID
NONHSAG011392.2	rs17444799	HOMA-IR	20081858
NONHSAG011392.2	rs17444799	Fasting insulin	20081858
NONHSAG011392.2	rs2958155	Gene expression of RBMS2 in peripheral blood monocytes	20502693
NONHSAG011392.2	rs2958155	Gene expression of BAZ2A in blood	21829388
NONHSAG011392.2	rs2958155	Gene expression of PRIM1 in peripheral blood monocytes	20502693
NONHSAG011392.2	rs2958155	Differential exon level expression of NACA [probe 3458101] in peripheral blood mononuclear cells	19222302
NONHSAG011392.2	rs2958155	Lactate:Methylamine	21572414
NONHSAG011392.2	rs2958155	Lactate:N,N-Dimethylglycine	21572414
NONHSAG011392.2	rs2958155	Lactate:Urea	21572414
NONHSAG011392.2	rs2958155	Alanine:N,N-Dimethylglycine	21572414
NONHSAG011392.2	rs2958155	Gene expression of RBMS2///ENST00000364709 in blood	21829388

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