An integrated knowledge database dedicated to ncRNAs, especially lncRNAs.
Detail infomation of NONHSAG011599.2

General info

NONCODE GENE IDNONHSAG011599.2
Chromosomechr12
Start Site67989381
End Site68234687
Strand+
Length13163
Assemblyhg38
ClassLinc;
Other Gene VersionsNONHSAG011599.1(old version)

Transcripts in Gene

NONCODE TRANSCRIPT ID
NONHSAT162382.1
NONHSAT162383.1
NONHSAT029276.2
NONHSAT029277.2
NONHSAT029278.2
NONHSAT029279.2
NONHSAT029281.2

Expression Profile (Data Source:Human Body Map)

adiposeadrenalbrainbrain_Rbreastcolon
0.0044075500000.00352717
foreskinheartheart_RHLF_1HLF_2kidney
000000.00192194
liverliver_RlunglymphNodeovaryplacenta_R
0.001289430000.001076040.00324433
prostateskeltalMuscletestestestes_RthyroidwhiteBloodCell
0.002075870.0006027270.004334420.053566400
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Exosome Expression Profile (Data Source: NCBI GEO)

A431_cellLine
(Squamous Cell Carcinoma Cell Line Exosomes)		BJ_cellLine
(Foreskin Fibroblast Cell Line Exosomes)		HepG2_cellLine
(Hepatocellular Carcinoma Cell Line Exosomes)		HUVEC_cellLine
(Human Umbilical Vein Endothelial Cell Line Exosomes)		invasive_NFPAs
(Invasive Non-functional Pituitary Adenomas Exosomes)
00.02582362.1521502.34848
non-invasive_NFPAs
(Non-invasive Non-functional Pituitary Adenomas Exosomes)		MCF7_cellLine
(Human Breast Cancer Cell Line Exosomes)		MDA-MB-231_cellLine
(Human Breast Cancer Cell Line Exosomes)		tuberculosis_patients_serum
(Active Tuberculosis Patients Serum Exosomes)		normal_people_blood
(Normal People Blood Exosomes)
2.89054003.95160.57192
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Expression Profile (Data Source: Single Cell)

Conservation Info

Note: T = There are transcripts in this region.

Disease related

Disease:

NONCODE IDGene SymbolDisease nameSource DatabaseSource PMID
NONHSAG011599.2IFNG-AS1multiple sclerosisLncRNAWiki0
NONHSAG011599.2IFNG-AS1multiple sclerosisLncRNADisease12719555

Mutations:

NONCODE IDSNP IDGWAS traitSource PMID
NONHSAG011599.2rs113978873Q9GZX6 protein abundance levels22595970
NONHSAG011599.2rs2906853Autism20663923
NONHSAG011599.2rs2906853Hypertension17554300
NONHSAG011599.2rs2906853Multiple complex diseases17554300
NONHSAG011599.2rs10878723Normoxic and mild-hypoxic adaptation in populations residing at low and moderate altitudes22628534
NONHSAG011599.2rs12422954Bipolar disorder22925353
NONHSAG011599.2rs3015002Autism20663923
NONHSAG011599.2rs7952790Normoxic and mild-hypoxic adaptation in populations residing at low and moderate altitudes22628534
NONHSAG011599.2rs10878728Gene expression of SMTNL1 in peripheral blood monocytes20502693
NONHSAG011599.2rs10878728Gene expression of EPB49 in peripheral blood monocytes20502693
NONHSAG011599.2rs10878728Diastolic blood pressure (DBP)21909115
NONHSAG011599.2rs7967588Transmission distortion22377632
NONHSAG011599.2rs7967588Maternal transmission distortion22377632
NONHSAG011599.2rs7967588Gene expression of SMTNL1 in peripheral blood monocytes20502693
NONHSAG011599.2rs10492200Autism with high IQ20663923
NONHSAG011599.2rs10492200Autism without verbal ability20663923
NONHSAG011599.2rs721793Alcohol craving with or without dependence22481050
NONHSAG011599.2rs10878729Autism with high IQ20663923
NONHSAG011599.2rs10748094Multiple complex diseases17554300
NONHSAG011599.2rs10748094Rheumatoid arthritis, gender differentiated17554300
NONHSAG011599.2rs10878733Hip bone size (males)18776929
NONHSAG011599.2rs4913393Autism without verbal ability20663923
NONHSAG011599.2rs4913393Autism with high IQ20663923
NONHSAG011599.2rs2215070Transmission distortion22377632
NONHSAG011599.2rs10878735Autism with high IQ20663923
NONHSAG011599.2rs4140780Paternal transmission distortion22377632
NONHSAG011599.2rs1861487Breast size (bra cup size in women)22747683
NONHSAG011599.2rs12815372Ulcerative colitis19915572
NONHSAG011599.2rs988606Celiac disease20190752
NONHSAG011599.2rs988606Diastolic blood pressure (DBP)17463246
NONHSAG011599.2rs988606Type 2 diabetes17463246
NONHSAG011599.2rs988606Neuroblastoma (brain cancer)21124317
NONHSAG011599.2rs7304878Ulcerative colitis19122664
NONHSAG011599.2rs2870957Celiac disease20190752
NONHSAG011599.2rs2870957Neuroblastoma (brain cancer)21124317
NONHSAG011599.2rs10735944Diastolic blood pressure (DBP)17463246
NONHSAG011599.2rs10735944Type 2 diabetes17463246
NONHSAG011599.2rs10735946Celiac disease20190752
NONHSAG011599.2rs10735946Neuroblastoma (brain cancer)21124317
NONHSAG011599.2rs2160439Diastolic blood pressure (DBP)17463246
NONHSAG011599.2rs2160439Type 2 diabetes17463246
NONHSAG011599.2rs2111056Rheumatoid arthritis, combined control dataset17554300
NONHSAG011599.2rs2111056Multiple complex diseases17554300
NONHSAG011599.2rs2111056Type 2 diabetes17463246
NONHSAG011599.2rs2111056Diastolic blood pressure (DBP)17463246
NONHSAG011599.2rs7311438Serum creatinine20383146
NONHSAG011599.2rs7134599Inflammatory bowel disease23128233
NONHSAG011599.2rs7134599Inflammatory bowel disease23128233
NONHSAG011599.2rs7134599Ulcerative colitis21297633
NONHSAG011599.2rs7134599Ulcerative colitis21297633
NONHSAG011599.2rs7134599Ulcerative colitis19122664
NONHSAG011599.2rs7134599Gene expression of RPL4 in normal prepouch ileum23474282
NONHSAG011599.2rs7134599Height (Pygmy height)22570615
NONHSAG011599.2rs7134599Gene expression of C10orf96 in normal prepouch ileum23474282
NONHSAG011599.2rs7134599Gene expression of MAS1 in normal prepouch ileum23474282
NONHSAG011599.2rs7134599Gene expression of OR9A4 in normal prepouch ileum23474282
NONHSAG011599.2rs7134599Gene expression of CES1P1 in normal prepouch ileum23474282
NONHSAG011599.2rs7134599Gene expression of MGAT4C in normal prepouch ileum23474282
NONHSAG011599.2rs7303207Gene expression of SAMD8 in peripheral blood monocytes20502693
NONHSAG011599.2rs1558744Ulcerative colitis19122664
NONHSAG011599.2rs1558744Selective immunoglobulin A deficiency (IgAD)20694011
NONHSAG011599.2rs1558744Ulcerative colitis20228799
NONHSAG011599.2rs1558744Ulcerative colitis20228799
NONHSAG011599.2rs1558744Medically refractory ulcerative colitis20848476
NONHSAG011599.2rs1558744Irritable bowel disorder19915574
NONHSAG011599.2rs1558744Ulcerative colitis19915574
NONHSAG011599.2rs11177059Gene expression of KIAA1754 (probeID ILMN_1805192) in breast tumors22522925
NONHSAG011599.2rs10878751Birth weight23202124
NONHSAG011599.2rs10784677Triglycerides change with statins20339536
NONHSAG011599.2rs10784677Total cholesterol20339536
NONHSAG011599.2rs10878752Decrease in FEV1/FVC ratio (in nonasthmatic and asthmatic participants)22424883
NONHSAG011599.2rs10878752Decrease in FEV1/FVC ratio (in nonasthmatic participants)22424883
NONHSAG011599.2rs10784678Total cholesterol20339536
NONHSAG011599.2rs10784678Triglycerides change with statins20339536
NONHSAG011599.2rs10467155Total cholesterol20339536
NONHSAG011599.2rs7973244Total cholesterol20339536
NONHSAG011599.2rs12321565Bipolar disorder and schizophrenia20889312
NONHSAG011599.2rs12321565Bipolar disorder and schizophrenia20889312
NONHSAG011599.2rs12321565Bipolar disorder20889312
NONHSAG011599.2rs11177074Gene expression of GTPBP8 in peripheral blood monocytes20502693
NONHSAG011599.2rs11177074Gene expression of FAM44A in peripheral blood monocytes20502693
NONHSAG011599.2rs11177074Gene expression of SLC25A13 in peripheral blood monocytes20502693
NONHSAG011599.2rs11177074Schizophrenia19571809
NONHSAG011599.2rs2069718Alopecia areata20596022
NONHSAG011599.2rs12308338Bipolar disorder and schizophrenia20889312
NONHSAG011599.2rs12308338Bipolar disorder20889312
NONHSAG011599.2rs12312186Gene expression of IL22 (ENSG00000127318) in dendritic cells22233810
NONHSAG011599.2rs10784688Height (Pygmy height)22570615
NONHSAG011599.2rs4913277Alopecia areata20596022
NONHSAG011599.2rs12309496Bipolar disorder and schizophrenia20889312
NONHSAG011599.2rs12309496Bipolar disorder20889312
NONHSAG011599.2rs4913278Major depressive disorder (Citalopram treatment response)19846067
NONHSAG011599.2rs2870951Alopecia areata20596022
NONHSAG011599.2rs2870950Body mass index (BMI), mean17903300
NONHSAG011599.2rs10492197Body mass index (BMI), mean17903300
NONHSAG011599.2rs971545Ulcerative colitis20228799
NONHSAG011599.2rs971545Tourette's syndrome22889924
NONHSAG011599.2rs7979999Refractive error23474815
NONHSAG011599.2rs4913419Refractive error23474815
NONHSAG011599.2rs2870946Ulcerative colitis19122664
NONHSAG011599.2rs2870946Ulcerative colitis19122664
NONHSAG011599.2rs2870946Gene expression of [probe 3610465 centered at chr5:133521687] in blood21829388
NONHSAG011599.2rs11177102Anti-TNF treatment response in rheumatoid arthritis (by DAS-28 score change at 3 months)23233654
NONHSAG011599.2rs7132188Gene expression of NME3 in Cerebellum20485568
NONHSAG011599.2rs2068016Body Mass Index0
NONHSAG011599.2rs10878795Bipolar disorder, combined control dataset, gender differentiated17554300
NONHSAG011599.2rs10878795Multiple complex diseases17554300
NONHSAG011599.2rs1125098Diabetic nephropathy in type 2 diabetes mellitus - end stage renal disease21150874

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