Detail infomation of NONHSAG012486.2--NONCODE

An integrated knowledge database dedicated to ncRNAs, especially lncRNAs.

Detail infomation of NONHSAG012486.2

General info

NONCODE GENE ID	NONHSAG012486.2
Chromosome	chr12
Start Site	119631089
End Site	119631386
Strand	-
Length	297
Assembly	hg38
Class	Linc;
Other Gene Versions	NONHSAG012486.1(old version)

Transcripts in Gene

NONCODE TRANSCRIPT ID

NONHSAT031086.2

Expression Profile (Data Source:Human Body Map)

adipose	adrenal	brain	brain_R	breast	colon
0	0.568019	0.674088	0.836883	1.78496	0.283229
foreskin	heart	heart_R	HLF_1	HLF_2	kidney
0	1.0475	0	0	0	0
liver	liver_R	lung	lymphNode	ovary	placenta_R
0	0	1.09774	0.554515	0	1.6034
prostate	skeltalMuscle	testes	testes_R	thyroid	whiteBloodCell
2.59037	0	0.400896	0.285945	0	0

Expression profile of NONHSAG012486 in Human tissues

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Exosome Expression Profile (Data Source: NCBI GEO)

A431_cellLine (Squamous Cell Carcinoma Cell Line Exosomes)	BJ_cellLine (Foreskin Fibroblast Cell Line Exosomes)	HepG2_cellLine (Hepatocellular Carcinoma Cell Line Exosomes)	HUVEC_cellLine (Human Umbilical Vein Endothelial Cell Line Exosomes)	invasive_NFPAs (Invasive Non-functional Pituitary Adenomas Exosomes)
0	0	0	0.714489	6.80354
non-invasive_NFPAs (Non-invasive Non-functional Pituitary Adenomas Exosomes)	MCF7_cellLine (Human Breast Cancer Cell Line Exosomes)	MDA-MB-231_cellLine (Human Breast Cancer Cell Line Exosomes)	tuberculosis_patients_serum (Active Tuberculosis Patients Serum Exosomes)	normal_people_blood (Normal People Blood Exosomes)
12.9409	0	0	6.24172	0

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Expression Profile (Data Source: Single Cell)

Conservation Info

Chordata
- Vertebrates
  - Manmals
    - Primates
      - Human
      - Chimp : chr12( len:297 )
      - Gorilla : chr12( len:297 )
      - Orangutan : chr12( len:294 )
      - Rhesus : chr11( len:297 )^T
    - Rodents
      - Mouse : chr5( len:225 )
      - Rat : chr12( len:236 )
    - Laurasiatheria
      - Pig : chr14( len:277 )^T
      - Cow : chr17( len:271 )
    - Opossum : N/A
    - Platypus : N/A
  - Birds
    - Chicken : N/A
- Actinopteryqii
  - Zebrafish : N/A

Note: T = There are transcripts in this region.

Disease related

Disease:

NONCODE ID	Gene Symbol	Disease name	Source Database	Source PMID
NONHSAG012486.2	7SK	AIDS,cardiac hypertrophy,gastric cancer	LncRNAWiki	0
NONHSAG012486.2	7SK	AIDS	LncRNADisease	20471949
NONHSAG012486.2	7SK	AIDS	LncRNADisease	21098020
NONHSAG012486.2	7SK	AIDS	LncRNADisease	20976203
NONHSAG012486.2	7SK	AIDS	LncRNADisease	21087998
NONHSAG012486.2	7SK	AIDS	LncRNADisease	22377309
NONHSAG012486.2	7SK	cancer	LncRNADisease	22377309
NONHSAG012486.2	7SK	cardiac hypertrophy	LncRNADisease	22377309
NONHSAG012486.2	7SK	gastric cancer	LncRNADisease	22488152
NONHSAG012486.2	RN7SK	human immunodeficiency virus infectious disease	LncRNADisease	21087998

Mutations:

NONCODE ID

SNP ID

GWAS trait

Source PMID

Potential Function

GO Number	Description
GO:0030048	actin filament-based movement
GO:0019827	stem cell maintenance
GO:0060337	type I interferon signaling pathway
GO:0032874	positive regulation of stress-activated MAPK cascade
GO:0000103	sulfate assimilation
GO:0010564	regulation of cell cycle process
GO:0035372	protein localization to microtubule
GO:0048513	organ development
GO:0010042	response to manganese ion
GO:0006091	generation of precursor metabolites and energy

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