Detail infomation of NONHSAG012518.3--NONCODE

An integrated knowledge database dedicated to ncRNAs, especially lncRNAs.

Detail infomation of NONHSAG012518.3

General info

NONCODE GENE ID	NONHSAG012518.3
Chromosome	chr12
Start Site	120481118
End Site	120495947
Strand	-
Length	11118
Assembly	hg38
Class	Linc;
Other Gene Versions	NONHSAG012518.2(old version)

Transcripts in Gene

NONCODE TRANSCRIPT ID

NONHSAT164102.1

NONHSAT232442.1

NONHSAT232443.1

NONHSAT031176.2

Expression Profile (Data Source:Human Body Map)

adipose	adrenal	brain	brain_R	breast	colon
0.000396517	0.0359264	0.0525385	0.118891	0.00366157	0.00155362
foreskin	heart	heart_R	HLF_1	HLF_2	kidney
0	0.00254606	0.00498133	0.00527459	0.000826929	0.0723829
liver	liver_R	lung	lymphNode	ovary	placenta_R
0.017156	0.00470106	0.0143078	0.000412992	0.00833988	0.0106683
prostate	skeltalMuscle	testes	testes_R	thyroid	whiteBloodCell
0.00510954	0.000178864	0.0176965	0.114688	0.00290653	0.0167738

Expression profile of NONHSAG012518 in Human tissues

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Exosome Expression Profile (Data Source: NCBI GEO)

A431_cellLine (Squamous Cell Carcinoma Cell Line Exosomes)	BJ_cellLine (Foreskin Fibroblast Cell Line Exosomes)	HepG2_cellLine (Hepatocellular Carcinoma Cell Line Exosomes)	HUVEC_cellLine (Human Umbilical Vein Endothelial Cell Line Exosomes)	invasive_NFPAs (Invasive Non-functional Pituitary Adenomas Exosomes)
5.98177	11.4363	1.71347	10.2753	7.63333
non-invasive_NFPAs (Non-invasive Non-functional Pituitary Adenomas Exosomes)	MCF7_cellLine (Human Breast Cancer Cell Line Exosomes)	MDA-MB-231_cellLine (Human Breast Cancer Cell Line Exosomes)	tuberculosis_patients_serum (Active Tuberculosis Patients Serum Exosomes)	normal_people_blood (Normal People Blood Exosomes)
9.61	0	0	5.80502	1.01933

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Expression Profile (Data Source: Single Cell)

Conservation Info

Chordata
- Vertebrates
  - Manmals
    - Primates
      - Human
      - Chimp : chr12( len:16228 )^T
      - Gorilla : chr12( len:15741 )^T
      - Orangutan : chr12( len:15342 )^T
      - Rhesus : chr11( len:16404 )
    - Rodents
      - Mouse : N/A
      - Rat : N/A
    - Laurasiatheria
      - Pig : N/A
      - Cow : chr17( len:16725 )
    - Opossum : N/A
    - Platypus : N/A
  - Birds
    - Chicken : N/A
- Actinopteryqii
  - Zebrafish : N/A

Note: T = There are transcripts in this region.

Disease related

Disease:

NONCODE ID	Gene Symbol	Disease name	Source Database	Source PMID
NONHSAG012518.3	NRAV	influenza A virus (IAV) infection	LncRNAWiki	0

Mutations:

NONCODE ID	SNP ID	GWAS trait	Source PMID
NONHSAG012518.3	rs7963543	College completion	23722424
NONHSAG012518.3	rs787824	Gene expression of GATC in peripheral blood monocytes	20502693
NONHSAG012518.3	rs787824	Gene expression of COQ5 in peripheral blood monocytes	20502693
NONHSAG012518.3	rs787820	Gene expression of GATC (probeID ILMN_1809034) in breast tumors	22522925
NONHSAG012518.3	rs11065140	Autism with low IQ	20663923

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