Detail infomation of NONHSAG012639.2--NONCODE

An integrated knowledge database dedicated to ncRNAs, especially lncRNAs.

Detail infomation of NONHSAG012639.2

General info

NONCODE GENE ID	NONHSAG012639.2
Chromosome	chr12
Start Site	124257831
End Site	124266132
Strand	-
Length	359
Assembly	hg38
Class	Linc;
Other Gene Versions	NONHSAG012639.1(old version)

Transcripts in Gene

NONCODE TRANSCRIPT ID

NONHSAT164149.1

NONHSAT164150.1

NONHSAT031656.2

NONHSAT031657.2

Expression Profile (Data Source:Human Body Map)

adipose	adrenal	brain	brain_R	breast	colon
0	0	0	0	0	0
foreskin	heart	heart_R	HLF_1	HLF_2	kidney
0	0	0	0	0	0
liver	liver_R	lung	lymphNode	ovary	placenta_R
0	0	0	0	0	0
prostate	skeltalMuscle	testes	testes_R	thyroid	whiteBloodCell
0	0	0	0	0	0

Expression profile of NONHSAG012639 in Human tissues

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Exosome Expression Profile (Data Source: NCBI GEO)

A431_cellLine (Squamous Cell Carcinoma Cell Line Exosomes)	BJ_cellLine (Foreskin Fibroblast Cell Line Exosomes)	HepG2_cellLine (Hepatocellular Carcinoma Cell Line Exosomes)	HUVEC_cellLine (Human Umbilical Vein Endothelial Cell Line Exosomes)	invasive_NFPAs (Invasive Non-functional Pituitary Adenomas Exosomes)
0	0	0	0	32.6296
non-invasive_NFPAs (Non-invasive Non-functional Pituitary Adenomas Exosomes)	MCF7_cellLine (Human Breast Cancer Cell Line Exosomes)	MDA-MB-231_cellLine (Human Breast Cancer Cell Line Exosomes)	tuberculosis_patients_serum (Active Tuberculosis Patients Serum Exosomes)	normal_people_blood (Normal People Blood Exosomes)
24.298	0	0	10.3275	0

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Expression Profile (Data Source: Single Cell)

Conservation Info

Chordata
- Vertebrates
  - Manmals
    - Primates
      - Human
      - Chimp : chr12( len:10369 )
      - Gorilla : chr12( len:8326 )^T
      - Orangutan : N/A
      - Rhesus : chr11( len:3778 )
    - Rodents
      - Mouse : N/A
      - Rat : N/A
    - Laurasiatheria
      - Pig : N/A
      - Cow : N/A
    - Opossum : N/A
    - Platypus : N/A
  - Birds
    - Chicken : N/A
- Actinopteryqii
  - Zebrafish : N/A

Note: T = There are transcripts in this region.

Disease related

Disease:

NONCODE ID	Gene Symbol	Disease name	Source Database	Source PMID
NONHSAG012639.2	XLOC_010235	gastric cancer	Lnc2Cancer	26045391

Mutations:

NONCODE ID	SNP ID	GWAS trait	Source PMID
NONHSAG012639.2	rs7972182	Common variable immunodeficiency	21497890
NONHSAG012639.2	rs12301479	Height	20881960
NONHSAG012639.2	rs7976444	Height	20881960
NONHSAG012639.2	rs11057548	Height	20881960
NONHSAG012639.2	rs10846637	Tuberculosis with early age of onset	22551897
NONHSAG012639.2	rs10846637	Height	20881960
NONHSAG012639.2	rs10846638	Height	20881960
NONHSAG012639.2	rs12372180	Height	20881960
NONHSAG012639.2	rs12370703	Height	20881960
NONHSAG012639.2	rs11057549	Height	20881960
NONHSAG012639.2	rs11057551	Height	20881960
NONHSAG012639.2	rs880333	Height	20881960
NONHSAG012639.2	rs10846641	Height	20881960
NONHSAG012639.2	rs10846641	Lung function (forced expiratory volume in 1 second)	24023788
NONHSAG012639.2	rs11614873	Height	20881960
NONHSAG012639.2	rs10161506	Multiple complex diseases	17554300
NONHSAG012639.2	rs10161506	Type 1 diabetes, combined control dataset	17554300

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