Detail infomation of NONHSAG012725.2--NONCODE

An integrated knowledge database dedicated to ncRNAs, especially lncRNAs.

Detail infomation of NONHSAG012725.2

General info

NONCODE GENE ID	NONHSAG012725.2
Chromosome	chr12
Start Site	128399977
End Site	128404814
Strand	+
Length	564
Assembly	hg38
Class	Linc;
Other Gene Versions	NONHSAG012725.1(old version)

Transcripts in Gene

NONCODE TRANSCRIPT ID

NONHSAT031914.2

Expression Profile (Data Source:Human Body Map)

adipose	adrenal	brain	brain_R	breast	colon
0	0	1.12755	0.783843	0	0
foreskin	heart	heart_R	HLF_1	HLF_2	kidney
0	0	0	0	0	0
liver	liver_R	lung	lymphNode	ovary	placenta_R
0	0	0	0	0	0
prostate	skeltalMuscle	testes	testes_R	thyroid	whiteBloodCell
0	0	0	0	0	0

Expression profile of NONHSAG012725 in Human tissues

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Exosome Expression Profile (Data Source: NCBI GEO)

A431_cellLine (Squamous Cell Carcinoma Cell Line Exosomes)	BJ_cellLine (Foreskin Fibroblast Cell Line Exosomes)	HepG2_cellLine (Hepatocellular Carcinoma Cell Line Exosomes)	HUVEC_cellLine (Human Umbilical Vein Endothelial Cell Line Exosomes)	invasive_NFPAs (Invasive Non-functional Pituitary Adenomas Exosomes)
0	0	0	0	13.6143
non-invasive_NFPAs (Non-invasive Non-functional Pituitary Adenomas Exosomes)	MCF7_cellLine (Human Breast Cancer Cell Line Exosomes)	MDA-MB-231_cellLine (Human Breast Cancer Cell Line Exosomes)	tuberculosis_patients_serum (Active Tuberculosis Patients Serum Exosomes)	normal_people_blood (Normal People Blood Exosomes)
15.9149	0	0	13.1807	0

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Expression Profile (Data Source: Single Cell)

Conservation Info

Chordata
- Vertebrates
  - Manmals
    - Primates
      - Human
      - Chimp : chr12( len:4830 )
      - Gorilla : chr12( len:4832 )
      - Orangutan : chr12( len:5455 )
      - Rhesus : chr11( len:4836 )
    - Rodents
      - Mouse : N/A
      - Rat : N/A
    - Laurasiatheria
      - Pig : N/A
      - Cow : N/A
    - Opossum : N/A
    - Platypus : N/A
  - Birds
    - Chicken : N/A
- Actinopteryqii
  - Zebrafish : N/A

Note: T = There are transcripts in this region.

Disease related

Disease:

NONCODE ID	Gene Symbol	Disease name	Source Database	Source PMID
NONHSAG012725.2	GLT1D1	hepatocellular carcinoma	Lnc2Cancer	27285756

Mutations:

NONCODE ID	SNP ID	GWAS trait	Source PMID
NONHSAG012725.2	rs1401098	Rapid visual processing	19734545
NONHSAG012725.2	rs1401098	Alcohol consumption	20877124
NONHSAG012725.2	rs1401098	Blood pressure, CVD RF and other traits (body mass index (BMI), waist:hip ratio, renin activity in plasma, aldosterone concentration in plasma, BNP levels in plasma, alcohol consumption)	20877124

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