Detail infomation of NONHSAG012732.3--NONCODE

An integrated knowledge database dedicated to ncRNAs, especially lncRNAs.

Detail infomation of NONHSAG012732.3

General info

NONCODE GENE ID	NONHSAG012732.3
Chromosome	chr12
Start Site	129109628
End Site	129113303
Strand	+
Length	2281
Assembly	hg38
Class	Linc;
Other Gene Versions	NONHSAG012732.2(old version)

Transcripts in Gene

NONCODE TRANSCRIPT ID

NONHSAT163058.1

NONHSAT231707.1

NONHSAT231708.1

NONHSAT031927.2

NONHSAT031928.2

NONHSAT031929.2

NONHSAT031930.2

NONHSAT031931.2

Expression Profile (Data Source:Human Body Map)

adipose	adrenal	brain	brain_R	breast	colon
0.0845061	0.000589331	0.00946479	0.100765	0.0236295	0.00374045
foreskin	heart	heart_R	HLF_1	HLF_2	kidney
0	0	0	0	0	0.0080335
liver	liver_R	lung	lymphNode	ovary	placenta_R
0	0	0	0.000616816	0.0103291	0.0187143
prostate	skeltalMuscle	testes	testes_R	thyroid	whiteBloodCell
0	0.0149225	0.00690026	0.109609	0.000579759	0

Expression profile of NONHSAG012732 in Human tissues

Loading...

Exosome Expression Profile (Data Source: NCBI GEO)

A431_cellLine (Squamous Cell Carcinoma Cell Line Exosomes)	BJ_cellLine (Foreskin Fibroblast Cell Line Exosomes)	HepG2_cellLine (Hepatocellular Carcinoma Cell Line Exosomes)	HUVEC_cellLine (Human Umbilical Vein Endothelial Cell Line Exosomes)	invasive_NFPAs (Invasive Non-functional Pituitary Adenomas Exosomes)
0	0	5.8246	0	8.59412
non-invasive_NFPAs (Non-invasive Non-functional Pituitary Adenomas Exosomes)	MCF7_cellLine (Human Breast Cancer Cell Line Exosomes)	MDA-MB-231_cellLine (Human Breast Cancer Cell Line Exosomes)	tuberculosis_patients_serum (Active Tuberculosis Patients Serum Exosomes)	normal_people_blood (Normal People Blood Exosomes)
10.1344	0	0	9.56456	0

Loading...

Expression Profile (Data Source: Single Cell)

Conservation Info

Chordata
- Vertebrates
  - Manmals
    - Primates
      - Human
      - Chimp : chr12( len:3674 )
      - Gorilla : chr12( len:3671 )
      - Orangutan : N/A
      - Rhesus : chr11( len:3677 )
    - Rodents
      - Mouse : N/A
      - Rat : N/A
    - Laurasiatheria
      - Pig : N/A
      - Cow : N/A
    - Opossum : N/A
    - Platypus : N/A
  - Birds
    - Chicken : N/A
- Actinopteryqii
  - Zebrafish : N/A

Note: T = There are transcripts in this region.

Disease related

Disease:

NONCODE ID	Gene Symbol	Disease name	Source Database	Source PMID
NONHSAG012732.3	GLT1D1	hepatocellular carcinoma	Lnc2Cancer	27285756

Mutations:

NONCODE ID	SNP ID	GWAS trait	Source PMID
NONHSAG012732.3	rs7310361	Retinopathy in nondiabetics without hypertension	23393555
NONHSAG012732.3	rs10847773	Nonalcoholic fatty liver disease (Steatosis)	20708005
NONHSAG012732.3	rs10847773	Non-alcoholic fatty liver disease histology (other)	20708005
NONHSAG012732.3	rs10847773	Multiple complex diseases	17554300
NONHSAG012732.3	rs10847773	Hypertension, gender differentiated	17554300

NONCODE

Introduce of NONCODE

Browse NONCODE

Search a gene/transcript

Statistics

Blast

Genome

ID Conversion

Download

Bio-tools

ncFANs

CNCI

lnc-GFP

lncRNA Analysis pipeline