Detail infomation of NONHSAG012733.2--NONCODE

An integrated knowledge database dedicated to ncRNAs, especially lncRNAs.

Detail infomation of NONHSAG012733.2

General info

NONCODE GENE ID	NONHSAG012733.2
Chromosome	chr12
Start Site	129208600
End Site	129212718
Strand	+
Length	1706
Assembly	hg38
Class	Linc;
Other Gene Versions	NONHSAG012733.1(old version)

Transcripts in Gene

NONCODE TRANSCRIPT ID

NONHSAT163059.1

NONHSAT031933.2

NONHSAT031934.2

Expression Profile (Data Source:Human Body Map)

adipose	adrenal	brain	brain_R	breast	colon
0.000703374	0	0	0	0	0
foreskin	heart	heart_R	HLF_1	HLF_2	kidney
0	0	0	0	0	0
liver	liver_R	lung	lymphNode	ovary	placenta_R
0	0	0	0.000464102	0.00481747	0
prostate	skeltalMuscle	testes	testes_R	thyroid	whiteBloodCell
0	0	0	0.0250772	0.00973513	0.00444472

Expression profile of NONHSAG012733 in Human tissues

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Exosome Expression Profile (Data Source: NCBI GEO)

A431_cellLine (Squamous Cell Carcinoma Cell Line Exosomes)	BJ_cellLine (Foreskin Fibroblast Cell Line Exosomes)	HepG2_cellLine (Hepatocellular Carcinoma Cell Line Exosomes)	HUVEC_cellLine (Human Umbilical Vein Endothelial Cell Line Exosomes)	invasive_NFPAs (Invasive Non-functional Pituitary Adenomas Exosomes)
0	0	2.93921	0	9.59226
non-invasive_NFPAs (Non-invasive Non-functional Pituitary Adenomas Exosomes)	MCF7_cellLine (Human Breast Cancer Cell Line Exosomes)	MDA-MB-231_cellLine (Human Breast Cancer Cell Line Exosomes)	tuberculosis_patients_serum (Active Tuberculosis Patients Serum Exosomes)	normal_people_blood (Normal People Blood Exosomes)
15.9514	0	0	11.9661	0

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Expression Profile (Data Source: Single Cell)

Conservation Info

Chordata
- Vertebrates
  - Manmals
    - Primates
      - Human
      - Chimp : chr12( len:4096 )^T
      - Gorilla : chr12( len:4145 )
      - Orangutan : N/A
      - Rhesus : N/A
    - Rodents
      - Mouse : N/A
      - Rat : N/A
    - Laurasiatheria
      - Pig : N/A
      - Cow : N/A
    - Opossum : N/A
    - Platypus : N/A
  - Birds
    - Chicken : N/A
- Actinopteryqii
  - Zebrafish : N/A

Note: T = There are transcripts in this region.

Disease related

Disease:

NONCODE ID	Gene Symbol	Disease name	Source Database	Source PMID
NONHSAG012733.2	GLT1D1	hepatocellular carcinoma	Lnc2Cancer	27285756

Mutations:

NONCODE ID	SNP ID	GWAS trait	Source PMID
NONHSAG012733.2	rs1013740	Methylation levels at chr7:49783527-49783577 [hg18 coord, probe cg04454951] in Cerebellum	20485568
NONHSAG012733.2	rs1013741	Amyotrophic lateral sclerosis (ALS)	20801718
NONHSAG012733.2	rs1013741	Schizophrenia	19197363

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