Detail infomation of NONHSAG012994.2--NONCODE

An integrated knowledge database dedicated to ncRNAs, especially lncRNAs.

Detail infomation of NONHSAG012994.2

General info

NONCODE GENE ID	NONHSAG012994.2
Chromosome	chr13
Start Site	23243519
End Site	23247184
Strand	+
Length	3665
Assembly	hg38
Class	Linc;
Other Gene Versions	NONHSAG012994.1(old version)

Transcripts in Gene

NONCODE TRANSCRIPT ID

NONHSAT032458.2

Expression Profile (Data Source:Human Body Map)

adipose	adrenal	brain	brain_R	breast	colon
0	0.0227165	0	0	0.000778789	0
foreskin	heart	heart_R	HLF_1	HLF_2	kidney
0	0.0213032	0	0	0	0
liver	liver_R	lung	lymphNode	ovary	placenta_R
0.0156327	0	0	0	0.0142888	0
prostate	skeltalMuscle	testes	testes_R	thyroid	whiteBloodCell
0	0	0	0.0331435	0.0123729	0

Expression profile of NONHSAG012994 in Human tissues

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Exosome Expression Profile (Data Source: NCBI GEO)

A431_cellLine (Squamous Cell Carcinoma Cell Line Exosomes)	BJ_cellLine (Foreskin Fibroblast Cell Line Exosomes)	HepG2_cellLine (Hepatocellular Carcinoma Cell Line Exosomes)	HUVEC_cellLine (Human Umbilical Vein Endothelial Cell Line Exosomes)	invasive_NFPAs (Invasive Non-functional Pituitary Adenomas Exosomes)
0	0.568433	0.684078	0	4.6281
non-invasive_NFPAs (Non-invasive Non-functional Pituitary Adenomas Exosomes)	MCF7_cellLine (Human Breast Cancer Cell Line Exosomes)	MDA-MB-231_cellLine (Human Breast Cancer Cell Line Exosomes)	tuberculosis_patients_serum (Active Tuberculosis Patients Serum Exosomes)	normal_people_blood (Normal People Blood Exosomes)
4.13879	0	0	7.09669	0

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Expression Profile (Data Source: Single Cell)

Conservation Info

Chordata
- Vertebrates
  - Manmals
    - Primates
      - Human
      - Chimp : chr13( len:3751 )
      - Gorilla : chr13( len:3754 )
      - Orangutan : chr13( len:3650 )
      - Rhesus : N/A
    - Rodents
      - Mouse : N/A
      - Rat : N/A
    - Laurasiatheria
      - Pig : N/A
      - Cow : N/A
    - Opossum : N/A
    - Platypus : N/A
  - Birds
    - Chicken : N/A
- Actinopteryqii
  - Zebrafish : N/A

Note: T = There are transcripts in this region.

Disease related

Disease:

NONCODE ID	Gene Symbol	Disease name	Source Database	Source PMID
NONHSAG012994.2	TNFRSF19	ovarian cancer	Lnc2Cancer	27193186

Mutations:

NONCODE ID	SNP ID	GWAS trait	Source PMID
NONHSAG012994.2	rs9578562	Refractive error	23474815
NONHSAG012994.2	rs9580584	Acute interstitial lung disease in gefitinib-treated non-small cell lung cancer	21787189
NONHSAG012994.2	rs2018051	Multiple complex diseases	17554300
NONHSAG012994.2	rs2018051	Hypertension, combined control dataset	17554300
NONHSAG012994.2	rs2018051	Refractive error	23474815
NONHSAG012994.2	rs7995908	Cystatin C in serum	20383146
NONHSAG012994.2	rs2018273	Refractive error	23474815
NONHSAG012994.2	rs2018273	Multiple complex diseases	17554300
NONHSAG012994.2	rs2018273	Hypertension, combined control dataset	17554300
NONHSAG012994.2	rs2002748	Refractive error	23474815
NONHSAG012994.2	rs2002748	Hypertension, combined control dataset	17554300
NONHSAG012994.2	rs2002748	Multiple complex diseases	17554300

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