Detail infomation of NONHSAG012998.2--NONCODE

An integrated knowledge database dedicated to ncRNAs, especially lncRNAs.

Detail infomation of NONHSAG012998.2

General info

NONCODE GENE ID	NONHSAG012998.2
Chromosome	chr13
Start Site	23465873
End Site	23487464
Strand	+
Length	3332
Assembly	hg38
Class	Linc;
Other Gene Versions	NONHSAG012998.1(old version)

Transcripts in Gene

NONCODE TRANSCRIPT ID

NONHSAT165354.1

NONHSAT165355.1

NONHSAT032463.2

NONHSAT032464.2

NONHSAT032465.2

NONHSAT032466.2

NONHSAT032467.2

Expression Profile (Data Source:Human Body Map)

adipose	adrenal	brain	brain_R	breast	colon
0	0	0.0722344	0.0128652	0.0168339	0.00246415
foreskin	heart	heart_R	HLF_1	HLF_2	kidney
0	0	0	0	0.12987	9.70179
liver	liver_R	lung	lymphNode	ovary	placenta_R
0.00572842	0	0.00111097	0.00389562	0.144828	0.173861
prostate	skeltalMuscle	testes	testes_R	thyroid	whiteBloodCell
0.0146636	0	0.0840698	0.183133	0.00914452	0

Expression profile of NONHSAG012998 in Human tissues

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Exosome Expression Profile (Data Source: NCBI GEO)

A431_cellLine (Squamous Cell Carcinoma Cell Line Exosomes)	BJ_cellLine (Foreskin Fibroblast Cell Line Exosomes)	HepG2_cellLine (Hepatocellular Carcinoma Cell Line Exosomes)	HUVEC_cellLine (Human Umbilical Vein Endothelial Cell Line Exosomes)	invasive_NFPAs (Invasive Non-functional Pituitary Adenomas Exosomes)
0	15.6733	1.50489	0.162402	5.08891
non-invasive_NFPAs (Non-invasive Non-functional Pituitary Adenomas Exosomes)	MCF7_cellLine (Human Breast Cancer Cell Line Exosomes)	MDA-MB-231_cellLine (Human Breast Cancer Cell Line Exosomes)	tuberculosis_patients_serum (Active Tuberculosis Patients Serum Exosomes)	normal_people_blood (Normal People Blood Exosomes)
5.78186	0	0	9.19401	0

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Expression Profile (Data Source: Single Cell)

Conservation Info

Chordata
- Vertebrates
  - Manmals
    - Primates
      - Human
      - Chimp : chr13( len:21260 )
      - Gorilla : N/A
      - Orangutan : chr13( len:22441 )^T
      - Rhesus : N/A
    - Rodents
      - Mouse : N/A
      - Rat : N/A
    - Laurasiatheria
      - Pig : N/A
      - Cow : N/A
    - Opossum : N/A
    - Platypus : N/A
  - Birds
    - Chicken : N/A
- Actinopteryqii
  - Zebrafish : N/A

Note: T = There are transcripts in this region.

Disease related

Disease:

NONCODE ID	Gene Symbol	Disease name	Source Database	Source PMID
NONHSAG012998.2	TNFRSF19	ovarian cancer	Lnc2Cancer	27193186

Mutations:

NONCODE ID	SNP ID	GWAS trait	Source PMID
NONHSAG012998.2	rs10162002	Hypothyroidism	22493691
NONHSAG012998.2	rs10162002	Hypothyroidism	22493691
NONHSAG012998.2	rs10162002	Microalbuminuria	21355061
NONHSAG012998.2	rs3764067	Urinary albumin-to-creatinine ratio	21355061
NONHSAG012998.2	rs3764070	Hirschsprung?s disease	19196962
NONHSAG012998.2	rs3764070	Maternal transmission distortion	22377632
NONHSAG012998.2	rs3764070	Transmission distortion	22377632
NONHSAG012998.2	rs3764070	HDL cholesterol	20339536
NONHSAG012998.2	rs17078796	Microalbuminuria	21355061
NONHSAG012998.2	rs12100143	Urinary albumin-to-creatinine ratio	21355061
NONHSAG012998.2	rs11841564	Urinary albumin-to-creatinine ratio	21355061

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