Detail infomation of NONHSAG013005.3--NONCODE

An integrated knowledge database dedicated to ncRNAs, especially lncRNAs.

Detail infomation of NONHSAG013005.3

General info

NONCODE GENE ID	NONHSAG013005.3
Chromosome	chr13
Start Site	23888871
End Site	23897388
Strand	+
Length	6864
Assembly	hg38
Class	Linc;
Other Gene Versions	NONHSAG013005.2(old version)

Transcripts in Gene

NONCODE TRANSCRIPT ID

NONHSAT232615.1

NONHSAT232616.1

NONHSAT232617.1

NONHSAT232618.1

NONHSAT232619.1

NONHSAT232620.1

NONHSAT232621.1

NONHSAT232622.1

NONHSAT032479.2

NONHSAT032480.2

Expression Profile (Data Source:Human Body Map)

adipose	adrenal	brain	brain_R	breast	colon
0.0172262	0.0165546	0.283307	0.132914	0.22037	0.0160703
foreskin	heart	heart_R	HLF_1	HLF_2	kidney
0.0147822	0.552267	0	0.0158554	0.0383976	0.00374299
liver	liver_R	lung	lymphNode	ovary	placenta_R
0	0	0.0314296	0.019708	0.0042065	0
prostate	skeltalMuscle	testes	testes_R	thyroid	whiteBloodCell
0.0297719	0.361866	0.0883508	0.0923749	0.103075	0.0191851

Expression profile of NONHSAG013005 in Human tissues

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Exosome Expression Profile (Data Source: NCBI GEO)

A431_cellLine (Squamous Cell Carcinoma Cell Line Exosomes)	BJ_cellLine (Foreskin Fibroblast Cell Line Exosomes)	HepG2_cellLine (Hepatocellular Carcinoma Cell Line Exosomes)	HUVEC_cellLine (Human Umbilical Vein Endothelial Cell Line Exosomes)	invasive_NFPAs (Invasive Non-functional Pituitary Adenomas Exosomes)
1.9378	2.0211	0.73052	3.09002	5.61814
non-invasive_NFPAs (Non-invasive Non-functional Pituitary Adenomas Exosomes)	MCF7_cellLine (Human Breast Cancer Cell Line Exosomes)	MDA-MB-231_cellLine (Human Breast Cancer Cell Line Exosomes)	tuberculosis_patients_serum (Active Tuberculosis Patients Serum Exosomes)	normal_people_blood (Normal People Blood Exosomes)
5.08682	0	0	7.03396	0.472316

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Expression Profile (Data Source: Single Cell)

Conservation Info

Chordata
- Vertebrates
  - Manmals
    - Primates
      - Human
      - Chimp : N/A
      - Gorilla : N/A
      - Orangutan : N/A
      - Rhesus : N/A
    - Rodents
      - Mouse : N/A
      - Rat : N/A
    - Laurasiatheria
      - Pig : N/A
      - Cow : N/A
    - Opossum : N/A
    - Platypus : N/A
  - Birds
    - Chicken : N/A
- Actinopteryqii
  - Zebrafish : N/A

Note: T = There are transcripts in this region.

Disease related

Disease:

NONCODE ID	Gene Symbol	Disease name	Source Database	Source PMID
NONHSAG013005.3	TNFRSF19	ovarian cancer	Lnc2Cancer	27193186
NONHSAG013005.3	C1QTNF9B-AS1	prostate cancer	LncRNAWiki	0
NONHSAG013005.3	C1QTNF9B-AS1	prostat	LncRNADisease	15930275

Mutations:

NONCODE ID	SNP ID	GWAS trait	Source PMID
NONHSAG013005.3	rs7325450	High myopia	21640322
NONHSAG013005.3	rs7331047	High myopia	21640322
NONHSAG013005.3	rs1977381	Myopia (pathological)	21640322

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