Detail infomation of NONHSAG013730.2--NONCODE

An integrated knowledge database dedicated to ncRNAs, especially lncRNAs.

Detail infomation of NONHSAG013730.2

General info

NONCODE GENE ID	NONHSAG013730.2
Chromosome	chr13
Start Site	70107177
End Site	70139753
Strand	+
Length	32576
Assembly	hg38
Class	Linc;
Other Gene Versions	NONHSAG013730.1(old version)

Transcripts in Gene

NONCODE TRANSCRIPT ID

NONHSAT165865.1

NONHSAT034250.2

NONHSAT034251.2

NONHSAT034252.2

NONHSAT034253.2

Expression Profile (Data Source:Human Body Map)

adipose	adrenal	brain	brain_R	breast	colon
0.00238807	0.000171626	0.000197537	0.00414622	0.000546705	5.21795e-05
foreskin	heart	heart_R	HLF_1	HLF_2	kidney
0	0	0.000280523	0	0.00116156	0.00285153
liver	liver_R	lung	lymphNode	ovary	placenta_R
0	0.00158586	0	0.000172832	0.000226352	0.00145743
prostate	skeltalMuscle	testes	testes_R	thyroid	whiteBloodCell
6.79433e-05	8.05009e-05	0.0042587	0.0108612	7.23125e-05	0.000242772

Expression profile of NONHSAG013730 in Human tissues

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Exosome Expression Profile (Data Source: NCBI GEO)

A431_cellLine (Squamous Cell Carcinoma Cell Line Exosomes)	BJ_cellLine (Foreskin Fibroblast Cell Line Exosomes)	HepG2_cellLine (Hepatocellular Carcinoma Cell Line Exosomes)	HUVEC_cellLine (Human Umbilical Vein Endothelial Cell Line Exosomes)	invasive_NFPAs (Invasive Non-functional Pituitary Adenomas Exosomes)
0.408308	0	1.7853	0	1.77996
non-invasive_NFPAs (Non-invasive Non-functional Pituitary Adenomas Exosomes)	MCF7_cellLine (Human Breast Cancer Cell Line Exosomes)	MDA-MB-231_cellLine (Human Breast Cancer Cell Line Exosomes)	tuberculosis_patients_serum (Active Tuberculosis Patients Serum Exosomes)	normal_people_blood (Normal People Blood Exosomes)
2.40661	0	0	3.02227	0

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Expression Profile (Data Source: Single Cell)

Conservation Info

Chordata
- Vertebrates
  - Manmals
    - Primates
      - Human
      - Chimp : chr13( len:32670 )
      - Gorilla : chr13( len:32466 )
      - Orangutan : chr13( len:34718 )^T
      - Rhesus : chr17( len:29496 )
    - Rodents
      - Mouse : N/A
      - Rat : N/A
    - Laurasiatheria
      - Pig : N/A
      - Cow : N/A
    - Opossum : N/A
    - Platypus : N/A
  - Birds
    - Chicken : N/A
- Actinopteryqii
  - Zebrafish : N/A

Note: T = There are transcripts in this region.

Disease related

Disease:

NONCODE ID	Gene Symbol	Disease name	Source Database	Source PMID
NONHSAG013730.2	ATXN8OS	human spinocerebellar ataxia type 8	LncRNADisease	16804541
NONHSAG013730.2	ATXN8OS	human spinocerebellar ataxia type 8	LncRNADisease	19680539
NONHSAG013730.2	ATXN8OS	human spinocerebellar ataxia type 8	LncRNADisease	19229559
NONHSAG013730.2	ATXN8OS	human spinocerebellar ataxia type 8	LncRNADisease	20301445
NONHSAG013730.2	ATXN8OS	human spinocerebellar ataxia type 8	LncRNADisease	18841561
NONHSAG013730.2	ATXN8OS	human spinocerebellar ataxia type 8,Spinocerebellar ataxia type 8	LncRNAWiki	0
NONHSAG013730.2	ATXN8OS	Spinocerebellar ataxia type 8	LncRNADisease	20380817
NONHSAG013730.2	ATXN8OS	Spinocerebellar ataxia type 8	LncRNADisease	22814587
NONHSAG013730.2	ATXN8OS	Spinocerebellar ataxia type 8	LncRNADisease	23791884

Mutations:

NONCODE ID	SNP ID	GWAS trait	Source PMID
NONHSAG013730.2	rs9572380	Autism with verbal ability	20663923
NONHSAG013730.2	rs928021	Height	0
NONHSAG013730.2	rs928021	Height	0
NONHSAG013730.2	rs17086457	Neuroblastoma (brain cancer)	21124317
NONHSAG013730.2	rs9599553	Hemoglobin (Hb)	20534544
NONHSAG013730.2	rs167255	Hemoglobin (Hb)	20534544

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