Detail infomation of NONHSAG014189.2--NONCODE

An integrated knowledge database dedicated to ncRNAs, especially lncRNAs.

Detail infomation of NONHSAG014189.2

General info

NONCODE GENE ID	NONHSAG014189.2
Chromosome	chr13
Start Site	110894638
End Site	110899173
Strand	-
Length	802
Assembly	hg38
Class	Linc;
Other Gene Versions	NONHSAG014189.1(old version)

Transcripts in Gene

NONCODE TRANSCRIPT ID

NONHSAT167270.1

NONHSAT035188.2

Expression Profile (Data Source:Human Body Map)

adipose	adrenal	brain	brain_R	breast	colon
0.602196	0.0431048	0.0152121	0	0.692445	0.206939
foreskin	heart	heart_R	HLF_1	HLF_2	kidney
0	0.366223	0	0	0.251987	0.184019
liver	liver_R	lung	lymphNode	ovary	placenta_R
0	0	0.766542	0.240407	0.0129365	0.652994
prostate	skeltalMuscle	testes	testes_R	thyroid	whiteBloodCell
0.388695	0.0886225	0	0	0.0653859	0

Expression profile of NONHSAG014189 in Human tissues

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Exosome Expression Profile (Data Source: NCBI GEO)

A431_cellLine (Squamous Cell Carcinoma Cell Line Exosomes)	BJ_cellLine (Foreskin Fibroblast Cell Line Exosomes)	HepG2_cellLine (Hepatocellular Carcinoma Cell Line Exosomes)	HUVEC_cellLine (Human Umbilical Vein Endothelial Cell Line Exosomes)	invasive_NFPAs (Invasive Non-functional Pituitary Adenomas Exosomes)
0	75.1745	0	70.3689	3.7757
non-invasive_NFPAs (Non-invasive Non-functional Pituitary Adenomas Exosomes)	MCF7_cellLine (Human Breast Cancer Cell Line Exosomes)	MDA-MB-231_cellLine (Human Breast Cancer Cell Line Exosomes)	tuberculosis_patients_serum (Active Tuberculosis Patients Serum Exosomes)	normal_people_blood (Normal People Blood Exosomes)
1.28194	0	0	1.15339	0

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Expression Profile (Data Source: Single Cell)

Conservation Info

Chordata
- Vertebrates
  - Manmals
    - Primates
      - Human
      - Chimp : chr13( len:4519 )
      - Gorilla : chr13( len:4687 )
      - Orangutan : chr13( len:4511 )
      - Rhesus : chr17( len:4567 )
    - Rodents
      - Mouse : N/A
      - Rat : N/A
    - Laurasiatheria
      - Pig : N/A
      - Cow : N/A
    - Opossum : N/A
    - Platypus : N/A
  - Birds
    - Chicken : N/A
- Actinopteryqii
  - Zebrafish : N/A

Note: T = There are transcripts in this region.

Disease related

Disease:

NONCODE ID	Gene Symbol	Disease name	Source Database	Source PMID
NONHSAG014189.2	LINC00346	cancer	LncRNAWiki	0

Mutations:

NONCODE ID	SNP ID	GWAS trait	Source PMID
NONHSAG014189.2	rs2148568	Gene expression of ANKRD10 in blood	21829388
NONHSAG014189.2	rs2148568	Gene expression of probe 215504_x_at in lymphoblastoid cell lines	17873877
NONHSAG014189.2	rs2148568	Gene expression of LINC00346 in normal prepouch ileum	23474282
NONHSAG014189.2	rs9559902	Gene expression of probe 215504_x_at in lymphoblastoid cell lines	17873877
NONHSAG014189.2	rs9521984	Gene expression of ANKRD10 in peripheral blood monocytes	20502693
NONHSAG014189.2	rs9521984	Allele-specific Expression Patterns in human glioblastoma cell line U87MG	22467206
NONHSAG014189.2	rs9521984	Gene expression of KCNRG in peripheral blood monocytes	20502693
NONHSAG014189.2	rs75301542	Allele-specific Expression Patterns in human glioblastoma cell line U87MG	22467206

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