An integrated knowledge database dedicated to ncRNAs, especially lncRNAs.
Detail infomation of NONHSAG016109.3

General info

NONCODE GENE IDNONHSAG016109.3
Chromosomechr14
Start Site105582801
End Site106592970
Strand+
Length9876
Assemblyhg38
ClassLinc;
Other Gene VersionsNONHSAG016109.2(old version)

Transcripts in Gene

NONCODE TRANSCRIPT ID
NONHSAT234042.1
NONHSAT040379.2
NONHSAT040400.2
NONHSAT040401.2
NONHSAT040402.2
NONHSAT040403.2
NONHSAT040405.2
NONHSAT040406.2
NONHSAT040407.2
NONHSAT040408.2
NONHSAT040409.2
NONHSAT040430.2
NONHSAT040452.2

Expression Profile (Data Source:Human Body Map)

adiposeadrenalbrainbrain_Rbreastcolon
0.22988501.028561.797730.3317740.171029
foreskinheartheart_RHLF_1HLF_2kidney
0.5325450.187120.04189740.07690280.3234850.21972
liverliver_RlunglymphNodeovaryplacenta_R
0.06736840.000468012000.3023810.173342
prostateskeltalMuscletestestestes_RthyroidwhiteBloodCell
0.2224610.3728990.2075010.4607330.1475870.10158
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Exosome Expression Profile (Data Source: NCBI GEO)

A431_cellLine
(Squamous Cell Carcinoma Cell Line Exosomes)		BJ_cellLine
(Foreskin Fibroblast Cell Line Exosomes)		HepG2_cellLine
(Hepatocellular Carcinoma Cell Line Exosomes)		HUVEC_cellLine
(Human Umbilical Vein Endothelial Cell Line Exosomes)		invasive_NFPAs
(Invasive Non-functional Pituitary Adenomas Exosomes)
000.32982301.26795
non-invasive_NFPAs
(Non-invasive Non-functional Pituitary Adenomas Exosomes)		MCF7_cellLine
(Human Breast Cancer Cell Line Exosomes)		MDA-MB-231_cellLine
(Human Breast Cancer Cell Line Exosomes)		tuberculosis_patients_serum
(Active Tuberculosis Patients Serum Exosomes)		normal_people_blood
(Normal People Blood Exosomes)
0.129723000.047211610.3277
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Expression Profile (Data Source: Single Cell)

Conservation Info

  • Chordata
    • Vertebrates
      • Manmals
        • Primates
          • Human
          • Chimp : N/A
          • Gorilla : N/A
          • Orangutan : N/A
          • Rhesus : N/A
        • Rodents
          • Mouse : N/A
          • Rat : N/A
        • Laurasiatheria
          • Pig : N/A
          • Cow : N/A
        • Opossum : N/A
        • Platypus : N/A
      • Birds
        • Chicken : N/A
    • Actinopteryqii
      • Zebrafish : N/A

Note: T = There are transcripts in this region.

Disease related

Disease:

NONCODE IDGene SymbolDisease nameSource DatabaseSource PMID
NONHSAG016109.3KIAA0125gallbladder cancerLnc2Cancer26448925

Mutations:

NONCODE IDSNP IDGWAS traitSource PMID
NONHSAG016109.3rs7152602Asthma20860503
NONHSAG016109.3rs34398108Immunoglobulin gamma (IgG) index in multiple sclerosis23225573
NONHSAG016109.3rs11621145Immunoglobulin gamma (IgG) index in multiple sclerosis23225573
NONHSAG016109.3rs1134590Immunoglobulin gamma (IgG) index in multiple sclerosis23225573
NONHSAG016109.3rs11160868Immunoglobulin gamma (IgG) index in multiple sclerosis23225573
NONHSAG016109.3rs10136766Immunoglobulin gamma (IgG) index in multiple sclerosis23225573
NONHSAG016109.3rs10136766IgG levels23225573
NONHSAG016109.3rs34295723Immunoglobulin gamma (IgG) index in multiple sclerosis23225573
NONHSAG016109.3rs12897751Immunoglobulin gamma (IgG) index in multiple sclerosis23225573
NONHSAG016109.3rs12884389Immunoglobulin gamma (IgG) index in multiple sclerosis23225573
NONHSAG016109.3rs2725142Immunoglobulin gamma (IgG) index in multiple sclerosis23225573
NONHSAG016109.3rs2753571Immunoglobulin gamma (IgG) index in multiple sclerosis23225573
NONHSAG016109.3rs17112693Type 1 diabetes, combined control dataset17554300
NONHSAG016109.3rs2753498Gene expression of hmm3577 in CEU lymphoblastoid cell lines17873874
NONHSAG016109.3rs1981496Multiple complex diseases17554300
NONHSAG016109.3rs1981496Type 1 diabetes17554300
NONHSAG016109.3rs7149857Multiple complex diseases17554300
NONHSAG016109.3rs7149857Rheumatoid arthritis, combined control dataset, gender differentiated17554300
NONHSAG016109.3rs10139594Gene expression of TMEM16J in lymphoblastoid cell lines18193047
NONHSAG016109.3rs8005760Bipolar disorder22925353
NONHSAG016109.3rs11160980Allele-specific Expression Patterns in human glioblastoma cell line U87MG22467206
NONHSAG016109.3rs11160981Allele-specific Expression Patterns in human glioblastoma cell line U87MG22467206
NONHSAG016109.3rs7359080Bipolar disorder, combined control dataset17554300
NONHSAG016109.3rs7359080Multiple complex diseases17554300
NONHSAG016109.3rs8015048Gene expression of IGHVIII-38-1 in blood21829388
NONHSAG016109.3rs8015048Gene expression of ENST00000390622 in blood21829388
NONHSAG016109.3rs2073676Gene expression of IGHG1 [probe 240915_at] in lymphoblastoid cell lines17873877
NONHSAG016109.3rs9324088Late onset Alzheimer's disease18823527
NONHSAG016109.3rs10139506Gene expression of TMEM16J in lymphoblastoid cell lines18193047
NONHSAG016109.3rs47740012 hour insulin17463246
NONHSAG016109.3rs2073672hsa-miR-32* miRNA expression in lymphoblastoid cell lines 22658545
NONHSAG016109.3rs7143266Tetrology of fallot23297363
NONHSAG016109.3rs17113001Gene expression of TMEM20 in peripheral blood monocytes20502693

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