An integrated knowledge database dedicated to ncRNAs, especially lncRNAs.
Detail infomation of NONHSAG016292.1

General info

NONCODE GENE IDNONHSAG016292.1
Chromosomechr15
Start Site24591801
End Site24603338
Strand+
Length1125
Assemblyhg19
ClassLinc;
Other Gene VersionsNONHSAG016292.2

Transcripts in Gene

NONCODE TRANSCRIPT ID
NONHSAT040897.1
NONHSAT040898.1

Expression Profile (Data Source:)

adiposeadrenalbrainbrain_Rbreastcolon
foreskinheartheart_RHLF_1HLF_2kidney
liverliver_RlunglymphNodeovaryplacenta_R
prostateskeltalMuscletestestestes_RthyroidwhiteBloodCell
NA

Exosome Expression Profile (Data Source: NCBI GEO)

NA

Expression Profile (Data Source: Single Cell)

Conservation Info

  • Chordata
    • Vertebrates
      • Manmals
        • Primates
          • Human
          • Chimp : N/A
          • Gorilla : N/A
          • Orangutan : N/A
          • Rhesus : N/A
        • Rodents
          • Mouse : N/A
          • Rat : N/A
        • Laurasiatheria
          • Pig : N/A
          • Cow : N/A
        • Opossum : N/A
        • Platypus : N/A
      • Birds
        • Chicken : N/A
    • Actinopteryqii
      • Zebrafish : N/A

Note: T = There are transcripts in this region.

Disease related

Disease:

NONCODE IDGene SymbolDisease nameSource DatabaseSource PMID
NONHSAG016292.2C15orf2Angelman syndromeLncRNADisease17337158
NONHSAG016292.2C15orf2Prader-Willi syndromeLncRNADisease17337158
NONHSAG016292.2PWRN1Prader-Willi syndromeLncRNAWiki0

Mutations:

NONCODE IDSNP IDGWAS traitSource PMID
NONHSAG016292.2rs12914657Autism20663923
NONHSAG016292.2rs2173432Autism20663923
NONHSAG016292.2rs7497236Autism20663923
NONHSAG016292.2rs12901115Autism20663923
NONHSAG016292.2rs11161090Lung cancer in never smokers21866343
NONHSAG016292.2rs11161090Waist circumference in Type 2 diabetes17463246
NONHSAG016292.2rs11161090Type 2 diabetes17463246
NONHSAG016292.2rs7164616LDL cholesterol change with statins20339536
NONHSAG016292.2rs7164616Total cholesterol change with statins20339536
NONHSAG016292.2rs7496441LDL cholesterol change with statins20339536
NONHSAG016292.2rs7496441Total cholesterol change with statins20339536
NONHSAG016292.2rs11633615LDL cholesterol change with statins20339536
NONHSAG016292.2rs11633615Total cholesterol change with statins20339536
NONHSAG016292.2rs11633654LDL cholesterol change with statins20339536
NONHSAG016292.2rs11633654Total cholesterol change with statins20339536
NONHSAG016292.2rs11632679LDL cholesterol change with statins20339536
NONHSAG016292.2rs11632679Total cholesterol change with statins20339536
NONHSAG016292.2rs35600665Diastolic blood pressure (DBP) (mmHg) in children23251661
NONHSAG016292.2rs35600665Obesity-related traits23251661
NONHSAG016292.2rs11638905LDL cholesterol change with statins20339536
NONHSAG016292.2rs11638905Total cholesterol change with statins20339536
NONHSAG016292.2rs7496073Waist circumference in Type 2 diabetes17463246
NONHSAG016292.2rs3901472Platelet thrombus as measured by PFA-100ColA closure time upon shear stress22550155
NONHSAG016292.2rs11858159Platelet thrombus as measured by PFA-100ColA closure time upon shear stress22550155
NONHSAG016292.2rs80255573-Aminoisobutyrate:Hippurate21572414
NONHSAG016292.2rs11854546Alzheimer's disease19734902
NONHSAG016292.2rs6576352Smoking initiation24665060
NONHSAG016292.2rs12904329Differential exon level expression of GENSCAN00000022013 [probeset 3584270] in brain cortex19222302
NONHSAG016292.2rs12904329Differential exon level expression of BC034815 [probeset 3584360] in brain cortex19222302
NONHSAG016292.2rs12904329Differential exon level expression of BC034815 [probeset 3584366] in brain cortex19222302
NONHSAG016292.2rs8031555Paternal transmission distortion22377632
NONHSAG016292.2rs8031555Transmission distortion22377632
NONHSAG016292.2rs8038746Blood pressure, CVD RF and other traits (body mass index (BMI), waist:hip ratio, renin activity in plasma, aldosterone concentration in plasma, BNP levels in plasma, alcohol consumption)20877124
NONHSAG016292.2rs8038746Alcohol consumption20877124
NONHSAG016292.2rs7168789Triglycerides19060906
NONHSAG016292.2rs8025033Blood pressure, CVD RF and other traits (body mass index (BMI), waist:hip ratio, renin activity in plasma, aldosterone concentration in plasma, BNP levels in plasma, alcohol consumption)20877124
NONHSAG016292.2rs8025033Alcohol consumption20877124
NONHSAG016292.2rs7177703Triglycerides19060906
NONHSAG016292.2rs7177703HDL cholesterol19060906
NONHSAG016292.2rs6576366Triglycerides19060906
NONHSAG016292.2rs11858344Triglycerides19060906
NONHSAG016292.2rs11858344Hypertension17554300
NONHSAG016292.2rs11858344Multiple complex diseases17554300
NONHSAG016292.2rs11858344HDL cholesterol19060906
NONHSAG016292.2rs6420955Triglycerides19060906
NONHSAG016292.2rs6420955HDL cholesterol19060906
NONHSAG016292.2rs7171121Triglycerides19060906
NONHSAG016292.2rs4906669Gene expression of KRT80 in peripheral blood monocytes20502693
NONHSAG016292.2rs4906669HDL cholesterol19060906
NONHSAG016292.2rs6576373Triglycerides19060906
NONHSAG016292.2rs10873593Triglycerides19060906
NONHSAG016292.2rs12442416Triglycerides19060906
NONHSAG016292.2rs7171487Triglycerides19060906
NONHSAG016292.2rs12917244Triglycerides19060906
NONHSAG016292.2rs11161126Triglycerides19060906
NONHSAG016292.2rs7177586Triglycerides19060906
NONHSAG016292.2rs7495407Gene expression of KRT80 in peripheral blood monocytes20502693
NONHSAG016292.2rs7495407PC aa C38:319043545
NONHSAG016292.2rs7495407Triglycerides19060906
NONHSAG016292.2rs7495407SM C22:219043545
NONHSAG016292.2rs7495407PC aa C38:419043545
NONHSAG016292.2rs7495407PE aa C38:419043545
NONHSAG016292.2rs7495407PC aa C40:519043545
NONHSAG016292.2rs7495407PC aa C36:419043545
NONHSAG016292.2rs4906706Triglycerides19060906
NONHSAG016292.2rs4415989Triglycerides19060906
NONHSAG016292.2rs1947402Bipolar disorder in non-alcoholics21876473
NONHSAG016292.2rs1947402Cystatin C in serum20383146
NONHSAG016292.2rs12902137Periodontitis (DPAL)24024966
NONHSAG016292.2rs12902295Premature ovarian failure19508998
NONHSAG016292.2rs17114595Gene expression of KCNA5 in peripheral blood monocytes20502693
NONHSAG016292.2rs12102021Docetaxel response in lymphoblastoid cell lines23006423
NONHSAG016292.2rs8027714Pelvic organ prolapse22105264
NONHSAG016292.2rs6576381Gene expression of hsa-miR-34b in CEU lymphoblastoid cell lines21691150
NONHSAG016292.2rs1563099Transmission distortion22377632
NONHSAG016292.2rs975907Parkinson's disease17052657
NONHSAG016292.2rs975907Parkinson's disease (PD)17052657
NONHSAG016292.2rs11858016Periodontitis (DPAL)24024966
NONHSAG016292.2rs11854309Asthma22694930
NONHSAG016292.2rs8030136Periodontitis (DPAL)24024966
NONHSAG016292.2rs17114720Antibody titer to hepatitis B vaccination21764829
NONHSAG016292.2rs7179849Schizophrenia (in multiplex schizophrenia pedigrees)22885689
NONHSAG016292.2rs7179849Autism20663923
NONHSAG016292.2rs12910496Gene expression of SNRPN [probeset 1559546_s_at] in sputum21949713
NONHSAG016292.2rs7175885Gene expression of SNRPN [probeset 1559546_s_at] in sputum21949713

  NONCODE

Introduce of NONCODE
Browse NONCODE
Search a gene/transcript
Statistics
Blast
Genome
ID Conversion
Download

  Bio-tools

ncFANs
CNCI
lnc-GFP
lncRNA Analysis pipeline