An integrated knowledge database dedicated to ncRNAs, especially lncRNAs.
Detail infomation of NONHSAG026122.2

General info

NONCODE GENE IDNONHSAG026122.2
Chromosomechr19
Start Site47484268
End Site47501597
Strand+
Length5568
Assemblyhg38
ClassLinc;
Other Gene VersionsNONHSAG026122.3

Transcripts in Gene

NONCODE TRANSCRIPT ID

Expression Profile (Data Source:Human Body Map)

adiposeadrenalbrainbrain_Rbreastcolon
foreskinheartheart_RHLF_1HLF_2kidney
liverliver_RlunglymphNodeovaryplacenta_R
prostateskeltalMuscletestestestes_RthyroidwhiteBloodCell
NA

Exosome Expression Profile (Data Source: NCBI GEO)

NA

Expression Profile (Data Source: Single Cell)

Conservation Info

  • Chordata
    • Vertebrates
      • Manmals
        • Primates
          • Human
          • Chimp : N/A
          • Gorilla : N/A
          • Orangutan : N/A
          • Rhesus : N/A
        • Rodents
          • Mouse : N/A
          • Rat : N/A
        • Laurasiatheria
          • Pig : N/A
          • Cow : N/A
        • Opossum : N/A
        • Platypus : N/A
      • Birds
        • Chicken : N/A
    • Actinopteryqii
      • Zebrafish : N/A

Note: T = There are transcripts in this region.

Disease related

Disease:

NONCODE IDGene SymbolDisease nameSource DatabaseSource PMID

Mutations:

NONCODE IDSNP IDGWAS traitSource PMID
NONHSAG026122.3rs12460436HDL cholesterol20686565
NONHSAG026122.3rs830150HDL cholesterol20686565
NONHSAG026122.3rs830150Alzheimer's disease24755620
NONHSAG026122.3rs12460373Gene expression of GLTSCR1 in blood21829388
NONHSAG026122.3rs12460373Differential exon level expression of ENST00000314121 [probe 3866657] in brain cortex19222302
NONHSAG026122.3rs12460373Gene expression of [probe 1300369 centered at chr19:52470716] in blood21829388
NONHSAG026122.3rs12460373HDL cholesterol20686565
NONHSAG026122.3rs2242495HDL cholesterol20686565
NONHSAG026122.3rs8106455HDL cholesterol20686565
NONHSAG026122.3rs830146HDL cholesterol20686565

Potential Function

GO NumberDescription
GO:0007155cell adhesion
GO:0006366transcription from RNA polymerase II promoter
GO:0007409axonogenesis
GO:0007286spermatid development
GO:0042997negative regulation of Golgi to plasma membrane protein transport
GO:0051384response to glucocorticoid
GO:0016485protein processing
GO:0007205protein kinase C-activating G-protein coupled receptor signaling pathway
GO:0045918negative regulation of cytolysis
GO:0000187activation of MAPK activity

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