An integrated knowledge database dedicated to ncRNAs, especially lncRNAs.
Detail infomation of NONHSAG043252.1

General info

NONCODE GENE IDNONHSAG043252.1
Chromosomechr6
Start Site26602961
End Site26606885
Strand+
Length2859
Assemblyhg19
ClassLinc;
Other Gene VersionsNONHSAG043252.2

Transcripts in Gene

NONCODE TRANSCRIPT ID
NONHSAT108299.1

Expression Profile (Data Source:)

adiposeadrenalbrainbrain_Rbreastcolon
foreskinheartheart_RHLF_1HLF_2kidney
liverliver_RlunglymphNodeovaryplacenta_R
prostateskeltalMuscletestestestes_RthyroidwhiteBloodCell
NA

Exosome Expression Profile (Data Source: NCBI GEO)

NA

Expression Profile (Data Source: Single Cell)

Conservation Info

  • Chordata
    • Vertebrates
      • Manmals
        • Primates
          • Human
          • Chimp : N/A
          • Gorilla : N/A
          • Orangutan : N/A
          • Rhesus : N/A
        • Rodents
          • Mouse : N/A
          • Rat : N/A
        • Laurasiatheria
          • Pig : N/A
          • Cow : N/A
        • Opossum : N/A
        • Platypus : N/A
      • Birds
        • Chicken : N/A
    • Actinopteryqii
      • Zebrafish : N/A

Note: T = There are transcripts in this region.

Disease related

Disease:

NONCODE IDGene SymbolDisease nameSource DatabaseSource PMID

Mutations:

NONCODE IDSNP IDGWAS traitSource PMID
NONHSAG043252.2rs9379899Lung function, forced expiratory volume in 1 second (FEV1)20010835
NONHSAG043252.2rs9379899Lung function, ratio of forced expiratory volume in 1 second (FEV1) to forced vital capacity (FVC) (FEV1/FVC)20010835
NONHSAG043252.2rs6911540Rheumatoid arthritis20453842
NONHSAG043252.2rs12205310Gene expression of BTN3A2///BTN3A3 in blood21829388
NONHSAG043252.2rs12205310Gene expression of ABT1 [probe ILMN_11701] in osteoblasts treated with PGE221283786
NONHSAG043252.2rs12205310Gene expression of [probe 3390050 centered at chr6:26795418] in blood21829388
NONHSAG043252.2rs12205310Gene expression of BTN2A1 in blood21829388
NONHSAG043252.2rs12205310Gene expression of BTN3A3 in blood21829388
NONHSAG043252.2rs9379902Rheumatoid arthritis20453842

Potential Function

GO NumberDescription
GO:0006366transcription from RNA polymerase II promoter
GO:0007155cell adhesion
GO:0007286spermatid development
GO:0007409axonogenesis
GO:0007205protein kinase C-activating G-protein coupled receptor signaling pathway
GO:0042997negative regulation of Golgi to plasma membrane protein transport
GO:0051384response to glucocorticoid
GO:0042060wound healing
GO:0016485protein processing
GO:0030048actin filament-based movement

  NONCODE

Introduce of NONCODE
Browse NONCODE
Search a gene/transcript
Statistics
Blast
Genome
ID Conversion
Download

  Bio-tools

ncFANs
CNCI
lnc-GFP
lncRNA Analysis pipeline