Detail infomation of NONHSAT000923.2--NONCODE

Detail infomation of NONHSAT000923.2

General info
View in Genome Browser

NONCODE TRANSCRIPT ID	NONHSAT000923.2
NONCODE Gene ID	NONHSAG000386.2
Chromosome	chr1
Start Site	11843860
End Site	11848079
Strand	+
Exon Number	3
CNCI Score	-0.0139264
Length	936
Assembly	hg38
Other transcript Versions	NONHSAT000923.1(old version)

Sequence

>NONHSAT000923.2

GAAACTGCTGCTGGGTCTGGAGAGGTGAAGACCCGTGGCCAGCTTCTGTTGTTGCCATCGGCCATTGCTTTTTGTTCGCTTGCTTTTGGTTTTGCAAGAAGAGCGGCCTCTGTCTCTGATCTGCTTCAAATCATCATTCCATCAGTGACAGAAGTGGCTGTTCCATCAGTGGTCGCAGCCAGTTCAGCTCCTGCATCCATCCCCAAGTGTTCTGAGTGGAATTTGAGGCCTCCCCAACCACCTACCAAAAAAGGAGGGTGAAATGAAAGGAAGAAGAAAAACTCAGCATTCTTTCCTCTGACAAAGAGTAAAACGACAAGGAATATCGGCCTGAATTCTCTTCCCAAGAAGAAAGAAAGCACACCAACGCAGGCATTTGTCTTCTGTCCATGGTGCTGAAGTTTATTCACTTTCAAACCACTTTCAGTAACAGGTCTGCGTTGGACACGGCATTGTACATGGGATTAGCTCTGGTCTGACCTAGGAGCTGGAATGCCAGTAAAAGGAGGAAGCTCACGGTGGTGGTGGAGAAGGAGCTCATGCTGGCGTCGTCAAGGAGCAATCCACTGCTTGCTGCTCTGTCTCtcccctctggttcctctctggttcccctctCTTGGCCTACGTCTGTCCCTGTCTCCCAGCTGCCCAGTGCCGCCTCTTTTTATAGCCCCCCAGCTCTCCAAGCACGCAGGAGAGACAGAACCCTCCCCATTCTGTCACTTGCAGTGATAAAGCTGCCAAGTGAGAAGCCAGCAGGAGATGCCCTTTTAAAGTTATCATCCCGCAGGGCTTGTCACAGCCCCTCTCTGCCTTGGGCAGCCCCAACAGCCCCCCAGACCCTCAGCTGCAAGAGCCGCATTCTTACTGATTTGACTCAAGAGGCTCCCACTTCAAAGGTGTGAGAAGAGTAAAAAAGAGTCCTTGGTTATCTCA

Expression Profile(Data Source:Human Body Map)

adipose	adrenal	brain	brain_R	breast	colon
1.10582	2.68458	1.1394	0.604914	0.73508	0.763726
foreskin	heart	heart_R	HLF_1	HLF_2	kidney
2.19796	3.12287	0.141822	1.12347	0.533821	3.66062
liver	liver_R	lung	lymphNode	ovary	placenta_R
1.10248	0.18968	1.62224	2.27968	3.57259	0.657022
prostate	skeltalMuscle	testes	testes_R	thyroid	whiteBloodCell
1.40992	0.570729	1.46743	4.04822	2.53125	2.53139

Expression profile of NONHSAT000923 in Human tissues

Exosome Expression Profile(Data Source: NCBI GEO)

A431_cellLine (Squamous Cell Carcinoma Cell Line Exosomes)	BJ_cellLine (Foreskin Fibroblast Cell Line Exosomes)	HepG2_cellLine (Hepatocellular Carcinoma Cell Line Exosomes)	HUVEC_cellLine (Human Umbilical Vein Endothelial Cell Line Exosomes)	invasive_NFPAs (Invasive Non-functional Pituitary Adenomas Exosomes)
0	1.01282	0	0.313468	5.17871
non-invasive_NFPAs (Non-invasive Non-functional Pituitary Adenomas Exosomes)	MCF7_cellLine (Human Breast Cancer Cell Line Exosomes)	MDA-MB-231_cellLine (Human Breast Cancer Cell Line Exosomes)	tuberculosis_patients_serum (Active Tuberculosis Patients Serum Exosomes)	normal_people_blood (Normal People Blood Exosomes)
2.33921	0	0	1.37074	0

Structure Visualization

DataSource: show detail information

See experimental data visualization in DMS dataset or PARS dataset

Isoforms

Transcript ID

NONHSAT148394.1

NONHSAT000920.2

Data Sources

Source Name	Old Id
ensembl	ENST00000400892
gencode	ENST00000400892.2
lncipedia	lnc-CLCN6-1-2_dup1
NONCODEv4	NONHSAT000923
PMID26117828	TCONS_00000056
PMID26117828	PNCT_HSA000702