Detail infomation of NONHSAT001955.2--NONCODE

Detail infomation of NONHSAT001955.2

General info
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NONCODE TRANSCRIPT ID	NONHSAT001955.2
NONCODE Gene ID	NONHSAG000835.3
Chromosome	chr1
Start Site	28506350
End Site	28509633
Strand	+
Exon Number	2
CNCI Score	-0.0245760
Length	2614
Assembly	hg38
Other transcript Versions	NONHSAT001955.1(old version)

Sequence

>NONHSAT001955.2

atttttgtattcttagtggagacggggtttcgctatgttggtcaggctggttttgaactcctgatttccggtgatccaccaccctcggccttccaaagtgctgggattacaggcgtgagccaccgcgcctggccGGAAATCATGTAATTTAAAACTATATATGGGTGTCTTAGGCGGCATCGGTCCCAACTCTAAAGTACGCGTTAGACGGGCCTGGGCCAGAAGTGGGCCATGGAGACCTCGGGACCCGCAGGGCTGCCGCCCGACCCAGCGAGCCTCTGAAGGTGCACCGCCACCCCCACTGTTTATCTTACTGCCTCATAGTAGGCACATTGTCGTTCTCAATATAATTGCACACAGTTTTATTCTGGATCCTCATTTGCCTTTAAGAATTTTCTCAATTTTTCTTTTTATTTGATCGCACcactgcaacctccgcctgctgggctcaagcaattctcctgccgcagcctcccgagtagctgggactacaggcgtgtaccaccgcgcctggcttatttttgtatttttagtagagacgggatttcaccatgttggccaggctggtctccaacgcctgaccttgtggtccgccacgccAGGCCGAAGATTTTCATAATTTGGAAGCATTGCGTTTCGTAATTATGCTTTCTCGTATTTTTGTGATTTGGGTCATTTTTATTTTTATATTTTtaggattacaggcgtgagccatcgtgcctggccGATTTGGGGGTAATTAACAAGTCCACGTGTTTCATTTGAATTTAGGATAGCTGGGCCTAATTGTTGTCTTTGCTTCTGCGGTACCTTCCACATAGTACTAACCGCCTATTGTAAAGTAATTAGAATAGCTGAATATGCATGTTACCAGTCTAGAAACCGATTTTTTTTTAACACCCCACTGTGGACAGGGTGGAAACTCGTTTGCTTTCTTGTTTAAGATCTGTAGTAACATGAATGGATGAAATTGTTTCCTATTGGATTCTGTAAATTTATGCGTTACACTGATTGtccaacgtggatacacccgggaggtcactctccccgggctctgtccaagtggcgtaggggagcatagggctctgccccatgatgtacaagtccctttccacaacgttggaaataaagctgggcctcgtgtctgcgcctgcatattcctacagcttcccagagtcctgtcgacaattactggggagacaaaccatgcaggaaacagccTTCTAGAGCACTGAATCTGGATTGAAGTCtttttttttttttttttttttggagatggagtcgctctgttgcccaggctggagtgcagtggcgcactccattgcctctgcctcccgggttcaagtgattatgctaagtgattctcctgccttggcctcctgagtagctgggattacaggcccccgccaccacgccaggctaatttttgtatttttagtaaagacagggtttcaccatgttggtcaggctggtctcaaactcctgaccttgtgatccgccagcctctggcctcccaaaatgttgggattacaggcgtgagccaccacacctggcTGGATTGAAGTCTTAATACATGTTTAAGAAAAATTGGCTAAAAAGTAGCCAGGCATGATGATAGGTAGCTGgaggaaggagaatcgctggagcccaggagtgacctatactcaaacctatactccagtgccactgtactccaaccccaggcgatagcatgaggcccctcgttgaaaaaGTTTAGGGTTTTGCTGTACTAATAGATTAATATCTTGTTTTGCAGGATTTGTTAAGGATTCCAAGTAACTCTTATTTGGAGAGAAGACGATCTGCACTTCGCATTTTGGCATTGACATTTAATTTTAGGGTCCTTTATATAGAAGGGAGAGTAGGTAAACTGATTTTTTTTTTTAACAGGGAGGGTTTGACAATCTTTGGCAGACTTGGAGCAAAAGATTGAGGTGCATTTCATGCCTCCTTTTGagagtcttgctctgtcgcccaggctgtagtgcagtggcgcaatcttggctgcaacctcagcctcccaagtAGCTGGGATTACAAACATAAGCCACCACGCCCAGCCCTCATACCTCTTTTAAAAGTCGACCTGTTTTGCAGAAAGTCTGCTGTTTTTGTACTAAAGGCTTTGGAATTTGGCATTTAGCTAGGAATGCACATTCTTTCACCTCATTCATACTTTAAGAACCACAGAAGTGACTCTGCTTGGCCAGAAGGCACACTGTGTTGGTGGTTATATTAAAAGTCCTTGAGTATTTTGCTTTTCATgatcttgctcactgcaacttccgcctcccaggttcaggcgattctcctgcctcagcctcccaagtagctgcgactacaggcgtgtagcaccacacctggctaatttttgtatttttagtagagatgaggtttcaccatattggccaggctgttctcaactcctgacctcgtgatccgcccacctcagcctcctaaagtgctgggattacagctgtgagccaccctgcccggccACTTTTGTATGATTTCTAATGTATTTGTAATTTACCTAACAAATTGCCTAATCTGCTATGTTAATGTATTTATGAATTAAAATAAATACGACTGC

Expression Profile(Data Source:Human Body Map)

adipose	adrenal	brain	brain_R	breast	colon
1.12783e-66	0.00664057	0.0361683	0.0834828	0.0011582	0
foreskin	heart	heart_R	HLF_1	HLF_2	kidney
0.0136695	0.00380374	0	0	1.37979e-10	0.0533021
liver	liver_R	lung	lymphNode	ovary	placenta_R
7.77412e-11	0	0.00402678	0	0.00590409	1.46794e-12
prostate	skeltalMuscle	testes	testes_R	thyroid	whiteBloodCell
1.35033e-10	0	0.0020716	0.042502	0.0719326	0.00555642

Expression profile of NONHSAT001955 in Human tissues

Exosome Expression Profile(Data Source: NCBI GEO)

A431_cellLine (Squamous Cell Carcinoma Cell Line Exosomes)	BJ_cellLine (Foreskin Fibroblast Cell Line Exosomes)	HepG2_cellLine (Hepatocellular Carcinoma Cell Line Exosomes)	HUVEC_cellLine (Human Umbilical Vein Endothelial Cell Line Exosomes)	invasive_NFPAs (Invasive Non-functional Pituitary Adenomas Exosomes)
13.7669	85.0022	3.16748	106.479	6.56392
non-invasive_NFPAs (Non-invasive Non-functional Pituitary Adenomas Exosomes)	MCF7_cellLine (Human Breast Cancer Cell Line Exosomes)	MDA-MB-231_cellLine (Human Breast Cancer Cell Line Exosomes)	tuberculosis_patients_serum (Active Tuberculosis Patients Serum Exosomes)	normal_people_blood (Normal People Blood Exosomes)
8.93445	0	0	4.65991	0

Structure Visualization

DataSource: show detail information

See experimental data visualization in DMS dataset or PARS dataset

Isoforms

Transcript ID

Data Sources

Source Name	Old Id
PMID26117828	PNCT_HSA001596
PMID26117828	TCONS_00002850
ensembl	ENST00000437681
lncipedia	lnc-PHACTR4-2-3
gencode	ENST00000437681.1
NONCODEv4	NONHSAT001955