Detail infomation of NONHSAT005298.2--NONCODE

Detail infomation of NONHSAT005298.2

General info
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NONCODE TRANSCRIPT ID	NONHSAT005298.2
NONCODE Gene ID	NONHSAG002460.3
Chromosome	chr1
Start Site	112956460
End Site	112968034
Strand	+
Exon Number	3
CNCI Score	-0.0245760
Length	4658
Assembly	hg38
Other transcript Versions	NONHSAT005298.1(old version)

Sequence

>NONHSAT005298.2

AGACTCGCCCTTGGGTCCCTGTCTGACGAGCTCTAGGCAATCTGCCCTCGTTCGGGACACAACCATCGGTCTCACCCCTCAGTTTCTGCCAGAGAAAAAGGAAAAGTCACCGAGAGGCCTGACCCTGACGGGTGGGGGAGATGCGCGTGCGGAGTAGCGGGAAGCGACTGAGGAGCGGGGAATGGGCAGCATTTGAATGGATGCGGGTGCCGCTGGCACCCGGGAAGACGCTGGGGGCCGGCGCTgtagagccgggcatgggctgggatgtgtttggattccaatccgggcctgacaccagttcagtgacctcgggaagttccccaaccctccgggcctgtttcctccctctgaagtggcgacagtagtagaaccgacctcgtaggctcatcgggaggtcctgatgggagaacccatgcaacttgccaccatagagccaggcccgcggCGGTTGGCGCCTGGTGGGTATTAAAGACGAGTCGGGAAAGAAGAGCAGGTTGATAGACTGGATGCTGCTATGGTAATCTGCCTCAGGAAAATGCCGGACTGTTGTTTGCAAGCTGGTTAAGTGAGCAAATCTTGGGAAGATTTCAAGcacaccaacatggcacatgtatacatatgtaacaaacctgcacattgtgcacatgtaccctaaaacttaaagtgtaacaataataaaatttttttaaaaaagtttattcttaagtatcttatttttgtgtagttattgtaaatggaattatcttcctgatttcttttAGGAAAGGATTCTTTTTAAACAATATTTTGTCATTAAGAACACTGCCCCCCCCTCATAATATATAATAATTTAATAGGGAATATGGAAAATGTGAtttgcttttgaaccatgtttgaaaaaaggtttgctaaacaaatacctggagtaaagaagatAATGCCAATCCTAAAGACATTCTTTCTTTAAAGTTGAGAGCCCTCTCATTCAGAATATCATCATCTAATTTCAGGTTATATGTCAGGTGTAGTCCTACTGCTTTCAAAGGCCTATGTCTGGATCTAGGATGAATTTTGCCATTCTTTAAAGAAAGACTAACTCGGTATTCGTGAGATGCACTCTAAGCTCCTCCCTGACCTCCCCCGTTTCTCTTCAGCTCTCTTTGCTCTGTTTTGACCTATCACTTATCTTACCAGCTTGCACCAGTTTAGTATCCTAATCAGTTACTTCTCTGGCACTCTACTGACATGGCATGGCGCAGTCAAAATAGTTTGCTAGAAAACAAAATGTTTGCAATAAAAATGTCTTCAACATGACAAATAAGTCAAAAATTATTGTTTCCAACTGCTGGTTTTTTGTATGTTTAGTTATTCTGGTGGCCAGGGATTTGCTTTATTGCTTCTTTGGGCCTTTGAGAATTTTTTTGTGcacacacagacacacacacacacacacaTATATATATGTTTCTTAAGGAATCATATTGTACATACTGTTTCTTTCCACTAACacggaatctcactctgtctgccaggctggagtgcagtggcgagatctcagctcactgcaacctcggcctcccgggttcaagcgattctcctgcctcagcctcccaagtagctaggcttacaggggcgtgccaccatgcccgactgatttttgtatttttagtagagacagggtttcaccatgttggccaggctagtcttgaacccctgacctcagatccacccgcctcggcctcccaaattgctgggattacaggcgtgagccaccacgcctggccGCTGTTTACTACTTTTTAAATATTTGCAggctgggcgtggcagctcacgcctgtaatcccagcactttggaaggctgaggcaggtggatcacgaggtcgggagtttcagaccagcctggccaaagtggtgaaaccccgtctctactaaaaatacaaaaattggtggcgggtgcctgtaatcccagctactcgggaggctgaggcagagaattgcttgaacccgggaggcagaggttgtagtgagctgagatggcgccactgcattccagcctgggcgacagcgagcctttgtctcaaaaaatatatatatatatatatTTGCAATGGCTTGATAATATGAAACATTTACGTTGCTTCTTAATAATTATCTAAGAATTAATTTAGATTAAAAAGCACAAAAGTTTGAAACATACCTAAAATATTATGATAATCTGACAGTACTGCTTTAAAACTTTAAAGGTGGCAAAACAATCCATATGGAAAACAAGCAGCTGAGAATATTCCTTTTTGACCCATTTATCTTCAAATTCAAtttgttttcctttttttttttttttttgagatggagtcttgctctgtcgcccaggctggagtgcagtggcgcgattttggcgcactgcaagctcggcctcccaggttcacgccactctcctgcctcagcctcctgagtagctgggactacaggcacccaccaccacgtagagatggagtttcaccatgttagctaggatggtctcgatctcctgacctcgtgatccttccaccttggcctcccaaagtgctgggattacaggcgtgagccactgcacccggccAAATTAAATTTGTTTTTAACCAGATTACCTGAGGCTCAATCTATGTCATCCTAATTCCCACTCTGGTCTGATATGGCTTGACTCCTGTTCCTTGTTTTTGCTAGCCCAGGGGGATAGTTTTGACCTGTGCTCTTTGTAATGTACATCATCGCTATTTAGGATCTTTTCTAGGAAGCATTCTTTCTAGAGATGGTCCTATGTATTTGCCAGACCTGTTTTCTTCCTTGACCCCTAGCTACTAAAAGTCCTAACCCTGAGTAGCTtccccacctccctcttttcctccctcccttccctcctttcttccttccatctctAGTAAAGTATTTTAGGCAAATGGGATGGGGAGTTCAATAATAACAATAATAAATTGatgatagccaagatttctgggatacttaccatatgccaagcattgctctaagcactttagatgtagtaacactcattaattcctcacaaaaatgctataaactaggaactgttacaatccccattttacagacatatacagatacagagaggttaagtagcttccccaaggtcacataatcagtaTTGTCTCGAGTCATCAGAAAGTAGTCATCATggccgggcaagttgtctcacgcctgtaatcccagcactttgggaggccaaggcagatggatcacgaggtcaggagtttgagaccagcctggccaacatagtgaaaccctgtctctactaaaaatacaaaaattagccagatgtggtggcaggcacctgtagtcccagatacttgggaggctgaggcaggagaatggcttgaacctgggagggaaggtttacagtgagctgagaccgcaccatcacactccagccttggcaacagagcaagactctgcctgaaaaaaaaaaaaaaaagaaaGTAGTCATCATTTAGTTTTCACCAAAAATACACAAGTAGAAATTGTCATTTTTAGCTATTAATACCATAGGAGACTAATCCATAGAATTTAAGGCCATCTTGACTTAGAAAAACCCTGTTTTGGGTTCCTTTTATGTTAGTAGAGCAAAACAACCATTATGAAAGCATGTGCCATGAAAGGTGCCTTTGAAACCAGAGATTCACCACAGAGAACTACCCCTTGCTTATCTGAATTTGGGGTAGTTATCAGTCTCTAGTCAGCTAAGTTGGGGACAAAGATGATGGGACATGGTTTTGTTAGCAGCTTATCTAtttatttatttatttattttttgagatggagtttcactctttcacccaggctggagtgaagtggtgcaatctcggctcactgcaacgtccgccccctcggtgggttcaagcaattctcctgtgtcagcctccaaagcagctgggattacaggcgcatgccaccacaccaggctgatttttgtatgtttagtagagatgggatttcaccatgttggccaggctagtcttgaacttctgacctcaggtgatccacccacctcagcctcccaaagtgctgcaattacaggtgtgagtcaccacgcccagccAACTAACAGCTTAATTTTAAGGTCACCTATTTCTAGGAAGTTCTGGGTGTCCTGGTCCCCATATTCCATGCTATAAGATCATTCAGTGTGAGAACCTGGACTTTATAGCCCTCACCCAAAGCAGCAGCAGATAGTTGGAATTATTGGACAGCTGCACATCAAGCCTACTGTGATTCAGCTGAGGGGTGCATGCAGCGAAGGAGGCCTCTAACATCACAGTGACTGGCTTTGTGTATCCATCTGCCTGGGGATCCAGACCTGGGTGTTCTACCTGGACCTTCATACTGCTGCACTGGTGAGCAAGATGAGGCTTAAATAAAGCATACTATTCAATTTGTGGTGACCTCTGAGAACCCCAAATCTGCCATGAATCCCTGCACCACACAATACCTGTGACACCTGTGCCAAGGTGAGGTCCAGTAGCTACCAAACCTACTTCTGAGCTGCATATTAGAGTGAAGCCTTCCTCCCTACCCTCCCTCTGTCTTACCTTTTGCACAAATCATGGGTTCAGATGTTATACCTATTATTGCACTCTGATAAGttttttttttttttttttttGCAG

Expression Profile(Data Source:Human Body Map)

adipose	adrenal	brain	brain_R	breast	colon
0.0803207	0.162964	0.0097715	0.227853	0.151265	0
foreskin	heart	heart_R	HLF_1	HLF_2	kidney
0.0222103	0.0249105	0.0364362	0.161771	0.166067	0.0471344
liver	liver_R	lung	lymphNode	ovary	placenta_R
0.0187152	0.0310705	0.0171594	5.02028e-132	0.042191	0.209799
prostate	skeltalMuscle	testes	testes_R	thyroid	whiteBloodCell
0.0383025	0	0.020609	0.0928462	0.0542851	0.00301549

Expression profile of NONHSAT005298 in Human tissues

Exosome Expression Profile(Data Source: NCBI GEO)

A431_cellLine (Squamous Cell Carcinoma Cell Line Exosomes)	BJ_cellLine (Foreskin Fibroblast Cell Line Exosomes)	HepG2_cellLine (Hepatocellular Carcinoma Cell Line Exosomes)	HUVEC_cellLine (Human Umbilical Vein Endothelial Cell Line Exosomes)	invasive_NFPAs (Invasive Non-functional Pituitary Adenomas Exosomes)
0	6.11366	4.05909	3.45274	5.82877
non-invasive_NFPAs (Non-invasive Non-functional Pituitary Adenomas Exosomes)	MCF7_cellLine (Human Breast Cancer Cell Line Exosomes)	MDA-MB-231_cellLine (Human Breast Cancer Cell Line Exosomes)	tuberculosis_patients_serum (Active Tuberculosis Patients Serum Exosomes)	normal_people_blood (Normal People Blood Exosomes)
4.07138	0	0	3.58011	0

Structure Visualization

DataSource: show detail information

See experimental data visualization in DMS dataset or PARS dataset

Isoforms

Transcript ID

Data Sources

Source Name	Old Id
refseq	NR_103744
NAME	SLC16A1-AS1
lncipedia	lnc-LRIG2-4-1_dup1
noncodeV3	n377910
ensembl	ENST00000416193
NONCODEv4	NONHSAT005298
PMID26117828	TCONS_00002971
PMID26117828	PNCT_HSA134735
gencode	ENST00000416193.4